BIG Search

BIG Search is a scalable text search engine built based on ElasticSearch (a highly scalable open-source full-text search and analytics engine based on Apache Lucene). It features cross-domain search and facilitates users to gain access to a wide range of biomedical data, not only from NGDC databases but also partner databases throughout the world.

e.g., PRJCA000126;SAMC000385;tp53;EGFR; human; KaKs_Calculator

Total 27 record(s) from BioCode

tool: Do-It-Yourself Annotator
basicInfo: shotgun sequencing, and produce an annotated sequence in Genbank file format as output
tool: Prokaryotic Repeats Annotation Program
basicInfo: their protein functions. However, <30% of the prokaryotic genomes submitted to GenBank contain partial,)/GenBank feature table format for reading and displaying in Artemis, where it can be combined or
tool: ISQuest
basicInfo: in GenBank and were capable of detecting 82% of the ISs and transposases annotated in GenBank with 80% sequence
tool: BioRuby
basicInfo: and public web services, including BLAST, KEGG, GenBank, MEDLINE and GO. BioRuby comes with a
tool: Circleator
basicInfo: gene annotation and DNA sequence data from a GenBank flat file, (ii) displaying patterns of gene
tool: ESTprep
basicInfo: improvement in accurate EST feature identification and fidelity of results submitted to GenBank. AVAILABILITY
tool: FACIL genetic code prediction tool
basicInfo: potential alternative genetic codes. A total of 0.65% of the DNA sequences currently in Genbank encode
tool: Bioclojure
basicInfo: UniProtXML, Genbank XML, FASTA and FASTQ. In addition, it provides wrappers for key analysis programs
tool: Genome Annotation Transfer Utility
basicInfo: genomes have been sequenced. However, many of these have been deposited in GenBank without, as a GenBank, EMBL or XML-format file. The software is coded in Java and runs on a variety of
tool: PromoterExplorer
basicInfo: databases, including the EPD, DBTSS, GenBank and human chromosome 22. Experimental results show that consistent and promising performance can be achieved.