BioProject: Gene structure annotation of Seriola lalandi (GenBank assembly accession: GCA_003054885.1) Other

• Accession: PRJNA809494
• Title: Gene structure annotation of Seriola lalandi (GenBank assembly accession: GCA_003054885.1) Other
• Description: Gene structure annotation of Seriola lalandi (GenBank assembly accession: GCA_003054885.1)
• BasicInfo : PRJNA809494; Other; Agricultural

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BioProject: Bacterial endosymbionts, bacteriophage and organelles of the cryptomonad, Cryptomonas gyropyrenoidosa SAG 25.80

• Accession: PRJNA876733
• Title: Bacterial endosymbionts, bacteriophage and organelles of the cryptomonad, Cryptomonas gyropyrenoidosa SAG 25.80
• Description: Genomic characterization of symbionts in the cryptomonad, Cryptomonas gyropyrenoidosa SAG 25.80, including two bacterial endosymbionts, Megaira polyxenophila and Grellia numerosa, and one bacteriophage infecting M. polyxenophila called MAnkyphage (GenBank OP381185). The mitochondrial (GenBank OQ603491), plastid (GenBank OQ612619), and nucleomorph (GenBank) genomes of Cryptomonas gyropyrenoidosa SAG 25.80 were also sequenced.
• BasicInfo : PRJNA876733; Genome sequencing ; Evolution

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BioProject: Malania oleifera RefSeq BioProject

• Accession: PRJNA990690
• Title: Malania oleifera RefSeq BioProject
• Description: The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA472200).
• BasicInfo : PRJNA990690; Other;

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BioProject: Doryrhamphus excisus RefSeq BioProject

• Accession: PRJNA990801
• Title: Doryrhamphus excisus RefSeq BioProject
• Description: The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA851781).
• BasicInfo : PRJNA990801; Other; Evolution

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BioProject: Did you already register a BioSample for this sample, e.g. for the submission of the reads to SRA and/or of the genome to GenBank?

• Accession: PRJNA749810
• Title: Did you already register a BioSample for this sample, e.g. for the submission of the reads to SRA and/or of the genome to GenBank?
• Description: Flagellaria indica plastome
• BasicInfo : PRJNA749810; Raw sequence reads; Evolution
• Experiments: SRX11559112

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BioProject: SelT knockdown mouse fibroblast cells vs control cells

• Accession: PRJNA117827
• Title: SelT knockdown mouse fibroblast cells vs control cells
• Description: Analysis of gene expression in NIH 3T3 cells stably knockdown for Selt (GenBank accession number NM_001040396) using vector based siRNA technique in comparison to gene expression of vector transfected NIH 3T3 cells. Overall design: siSelT-1 construct (spanning nucleotides 205-224 of Selt, GenBank accession number NM_001040396) vs vector control; siSelT-5 construct (spanning nucleotides 971-989 of Selt, GenBank accession number NM_001040396) vs vector control; Two replicates per array for each oligos were carried out at different time points using RNA from different cultures of knockdown cells.
• BasicInfo : PRJNA117827; Transcriptome or Gene expression; ModelOrganism

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BioProject: ChIP-seq analysis with an antibody directed against the human H3K27ac protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1.

• Accession: PRJEB35023
• Title: ChIP-seq analysis with an antibody directed against the human H3K27ac protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1.
• Description: ChIP peaks were identified in both the human and viral genomes (genome assembly GRCh37 (hg19) and Epstein-Barr virus, Human Herpesvirus 4; GenBank accession KF717093.1).
• BasicInfo : PRJEB35023; Other;
• Experiments: ERX3603289 ERX3603286 ERX3603288 ERX3603287

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BioProject: Genome sequencing of Mycoplasma pneumoniae subtype 2b variant strain, KCH-402

• Accession: PRJDB4434
• Title: Genome sequencing of Mycoplasma pneumoniae subtype 2b variant strain, KCH-402
• Description: Mycoplasma pneumoniae is one of the simplest self-replicating bacteria known and is an etiological agent of pneumoniae and bronchitis in humans. M. pneumoniae strains can be classified into two distinct lineages (subtype 1 and 2) based on their p1 gene sequence that encode a major cytadhesin protein of this bacterium. The reference strains, M129-B7 (GenBank: CP003913) and FH (GenBank: CP010546) carry subtype 1 and 2 p1 genes, respectively. In addition, several variants of p1 gene sequences are also known. The strain 309 (GenBank: AP012303) carries variant 2a (subtype 2 variant) p1 gene sequence. In this study, we have sequenced complete genome of M. pneumoniae KCH-402 strain that has variant 2b p1 gene.
• BasicInfo : PRJDB4434; Genome sequencing ;

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BioProject: ChIP-seq analysis with an antibody directed against the human H3K4me1 protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1.

• Accession: PRJEB35108
• Title: ChIP-seq analysis with an antibody directed against the human H3K4me1 protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1.
• Description: Peaks were identified in both the human and viral (EBV (Human Herpesvirus 4 GenBank accession KF717093.1) genome.
• BasicInfo : PRJEB35108; Other;
• Experiments: ERX3619673 ERX3619675 ERX3619672 ERX3619674

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BioProject: ChIP-seq analysis with an antibody directed against the human SMC1 protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1

• Accession: PRJEB34845
• Title: ChIP-seq analysis with an antibody directed against the human SMC1 protein in Raji cells (Genbank: KF717093.1) prior to and post induction of BZLF1
• Description: Peaks were identified in both the human and viral (EBV (Human Herpesvirus 4; GenBank accession KF717093.1) genome.
• BasicInfo : PRJEB34845; Other;
• Experiments: ERX3584684 ERX3584687 ERX3584686 ERX3584685

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