Variation ID : sbi33825454

Variation Detail



Variation ID sbi33825454
Type INDEL
Position Chr01 21376-21397
Ref /Alleles AAGGGAGCAGAAGCTCACGGTG/ A
MAF A: 0.006
5' Flank TGGGGAATGTTGGATCGTTAGCTAGATTTG
3' Flank AAACGAAAACGAACCCCCACACACTACGGC

Individual Alleles

id Sample Id Type Alleles
1 101 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
2 103 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
3 107 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
4 11 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
5 110 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
6 123 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
7 131 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
8 132 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
9 135 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
10 137 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
11 138 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
12 14 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
13 140 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
14 141 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
15 144 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
16 150 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
17 154 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
18 159 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
19 16 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
20 161 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
21 167 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
22 168 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
23 170 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
24 173 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
25 175 Improved N|N
26 176 Improved N|N
27 182 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
28 186 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
29 190 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
30 192 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
31 194 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
32 195 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
33 197 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
34 J22 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
35 J26 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
36 J5 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
37 J50 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
38 2001 Landrace N|N
39 2005 Improved N|N
40 2008 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
41 2009 Landrace N|N
42 201 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
43 2010 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
44 2016 Improved N|N
45 2019 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
46 202 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
47 2021 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
48 2023 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
49 2026 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
50 2029 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
51 2030 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
52 2031 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
53 2036 Improved N|N
54 2037 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
55 2038 Improved N|N
56 2039 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
57 204 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
58 2042 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
59 2043 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
60 2048 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
61 2049 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
62 205 Improved N|N
63 2050 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
64 2052 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
65 2054 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
66 2056 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
67 2059 Improved N|N
68 206 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
69 2064 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
70 2065 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
71 2067 Improved N|N
72 2068 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
73 2069 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
74 2071 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
75 2074 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
76 2075 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
77 2076 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
78 2080 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
79 2081 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
80 2082 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
81 2086 Improved N|N
82 2088 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
83 260 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
84 261 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
85 262 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
86 263 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
87 286 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
88 29 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
89 3 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
90 302546 S.propinquum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
91 31 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
92 32 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
93 34 Improved N|N
94 346 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
95 348 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
96 353 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
97 355 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
98 357 Wild sorghum N|N
99 364 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
100 367 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
101 s37 S.propinquum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
102 s38 S.propinquum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
103 370 Landrace N|N
104 377 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
105 392 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
106 394 Wild sorghum N|N
107 40 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
108 42 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
109 43 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
110 45 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
111 47 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
112 48 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
113 51 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
114 53 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
115 56 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
116 61 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
117 62 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
118 66 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
119 67 Improved N|N
120 68 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
121 70 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
122 73 Improved N|N
123 75 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
124 88 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
125 89 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
126 91 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
127 92 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
128 93 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
129 94 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
130 95 Improved N|N
131 96 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
132 97 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
133 s1 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
134 s36 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
135 s2 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
136 s3 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
137 s32 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
138 s43 Weedy AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
139 s40 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
140 s41 Weedy AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
141 s39 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
142 s42 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
143 s47 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
144 s5 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
145 GW102 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
146 GW103 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
147 GW104 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
148 GW105 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
149 GW16 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
150 GW2 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
151 GW34 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
152 GW37 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
153 GW58 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
154 GW59 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
155 GW9 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
156 s4 Weedy AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
157 s6 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
158 s7 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
159 s8 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
160 s9 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
161 J101 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
162 J103 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
163 J112 Landrace A|A
164 J113 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
165 J129 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
166 J130 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
167 J136 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
168 J152 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
169 J2 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
170 J20 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
171 J4 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
172 J42 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
173 J44 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
174 J49 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
175 J52 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
176 J53 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
177 J54 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
178 J57 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
179 J59 Landrace N|N
180 J64 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
181 J66 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
182 J67 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
183 J69 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
184 J87 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
185 J99 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
186 s45 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
187 s11 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
188 s10 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
189 s46 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
190 s12 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
191 s13 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
192 MHMD Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
193 s14 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
194 s15 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
195 s34 Weedy AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
196 s33 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
197 s21 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
198 s16 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
199 s44 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
200 s35 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
201 s31 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
202 s17 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
203 s18 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
204 s20 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
205 s19 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
206 s22 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
207 s23 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
208 s24 Landrace AAGGGAGCAGAAGCTCACGGTG|A
209 s25 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
210 s26 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
211 s27 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
212 s28 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
213 s29 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
214 s30 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
215 SL25 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
216 SL105 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
217 SL108 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
218 SL109 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
219 SL12 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
220 SL129 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
221 SL130 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
222 SL135 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
223 SL136 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
224 SL137 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
225 SL138 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
226 SL140 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
227 SL141 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
228 SL19 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
229 SL28 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
230 SL32 Wild sorghum N|N
231 SL35 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
232 SL36 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
233 SL37 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
234 SL39 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
235 SL41 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
236 SL43 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
237 SL47 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
238 SL49 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
239 SL51 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
240 SL53 Wild sorghum N|N
241 SL62 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
242 SL83 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
243 SL97 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
244 s48 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
245 Tu13 Wild sorghum N|N
246 Tu14 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
247 Tu30 Wild sorghum AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
248 Tu5 Wild sorghum N|N
249 WSC5 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
250 WSC15 Landrace N|N
251 WSC19 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
252 WSC30 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
253 WSC52 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
254 WSC6 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
255 WSC61 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
256 WSC71 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
257 WSC72 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
258 WSC79 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
259 WSC94 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
260 WSC99 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
261 WSC100 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
262 WSC104 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
263 WSC105 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
264 WSC12 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
265 WSC13 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
266 WSC16 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
267 WSC17 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
268 WSC18 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
269 WSC20 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
270 WSC24 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
271 WSC25 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
272 WSC29 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
273 WSC31 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
274 WSC32 Landrace N|N
275 WSC34 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
276 WSC38 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
277 WSC39 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
278 WSC40 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
279 WSC54 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
280 WSC56 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
281 WSC59 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
282 WSC68 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
283 WSC70 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
284 WSC73 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
285 WSC81 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
286 WSC85 Improved AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
287 WSC91 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
288 WSC93 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG
289 WSC98 Landrace AAGGGAGCAGAAGCTCACGGTG|AAGGGAGCAGAAGCTCACGGTG

Alleles Distribution

Gene Annotation



Variation ID Gene Consequence Transcript Type cDNA Source/target codon Protein Name protein pos source/target Amino acid
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.2 mRNA Sobic.001G000400.2.p
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.5 mRNA Sobic.001G000400.5.p
sbi33825454 Sobic.001G000300 downstream gene variant |MODIFIER Sobic.001G000300.2 mRNA Sobic.001G000300.2.p
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.4 mRNA Sobic.001G000400.4.p
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.3 mRNA Sobic.001G000400.3.p
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.1 mRNA Sobic.001G000400.1.p
sbi33825454 Sobic.001G000400 downstream gene variant |MODIFIER Sobic.001G000400.6 mRNA Sobic.001G000400.6.p

Genome Browser