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B
io
C
ode
a repository archiving codes for bioinformatics tools
Phylogenetic inference
Phylogenetic tree visualization
Phylogenetic network construction
Discrete character evolution
Ancestral sequence reconstruction
Community phylogenetics
Cophylogeny reconstruction
Reconciliation visualization
Phylogeographic reconstruction
Supertree construction
Tumor progression
Viral sequence classification
Phylogenetic congruence
Tree comparison
Haplogroup prediction
Model selection
Workflows/pipelines
Missing data prediction
Tip dating
Comparative analysis
Ancestral genome reconstruction
Other tools