URL: | http://gyanxet-beta.com/lncedb/ |
Full name: | database of human long noncoding RNA acting as competing endogenous RNA |
Description: | lnCeDB provides a database of human lncRNAs (from GENCODE 19 version) that can potentially act as ceRNAs. The putative mRNA targets of human miRNAs and the targets mapped to AGO clipped regions are collected from TargetScan and StarBase respectively. To find out the likelihood of an lncRNA-mRNA pair for actually being ceRNA, ceRNA score is calculated and the P-value for each ceRNA pair is determined. It houses miRNA targets on 22,286 lncRNAs out of 25,978 lncRNA transcripts in GENCODE 19. |
Year founded: | 2014 |
Last update: | 2014-06-13 |
Version: | v1.0 |
Accessibility: |
Unaccessible
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Country/Region: | India |
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University/Institution: | Indian Association for the Cultivation of Science |
Address: | Kolkata, West Bengal, India |
City: | Kolkata |
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Country/Region: | India |
Contact name (PI/Team): | Jayprokas Chakrabarti |
Contact email (PI/Helpdesk): | j.chakrabarti@gyanxet.com |