Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

TFClass

General information

URL: http://tfclass.bioinf.med.uni-goettingen.de
Full name: Classification of Human Transcription Factors and Mammalian Orthologs
Description: TFClass is a classification of human transcription factors (TFs) and their mammalian orthologs based on the characteristics of their DNA-binding domains.
Year founded: 2013
Last update: 2017-10-26
Version: v3.0
Accessibility:
Accessible
Country/Region: Germany

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Georg August University
Address: Goldschmidtstr. 1, 37077 Göttingen, Germany
City: Göttingen
Province/State:
Country/Region: Germany
Contact name (PI/Team): Edgar Wingender
Contact email (PI/Helpdesk): edgar.wingender@bioinf.med.uni-goettingen.de

Publications

Ranking

All databases:
588/6274 (90.644%)
Gene genome and annotation:
211/1782 (88.215%)
Expression:
94/1213 (92.333%)
Structure:
61/872 (93.119%)
588
Total Rank
211
Citations
19.182
z-index

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Word cloud

Created with Highcharts 10.0.0TFClasshumanTFsclassificationfactorstranscriptionDNA-bindingdifferentTFgenesgeneorthologsTFClass:accordingdomainscanproteinsschemacomprisingfourfamilyfamiliesindividualproductsproteinisoformshttp://tfclass.bioinf.med.uni-goettingen.de/classifiesexpandedinformationprovidesdatabaseexpandablehierarchicalcomprehensivebasedTranscriptionconstitutelargefunctionaldirectlyregulatingactivitysequence-specificthusreadingencodedcis-regulatoryDNAelementspromotersenhancersregulatoryregionsgenomesix-levelabstractionscriteriafifthlevelrepresentssixthAltogetherninesuperclassesidentified40classes111Counted1558classifiedfar>2900includinggeneratedalternativesplicingprocessingeventshopeprovidebasisdecipheringprotein-DNArecognitioncodes;moreoverusedconstructingtranscriptionalnetworksinferringadditionalTF-targetrelationsrodentaims

Record metadata

Created on: 2015-06-20
Curated by:
Dong Zou [2019-03-23]
[2018-11-28]
hadia abbasi [2018-08-15]
Dong Zou [2018-03-05]
Lina Ma [2016-09-26]
Zhang Zhang [2016-05-08]
Guangyu Wang [2016-04-01]
Guangyu Wang [2015-11-24]
Guangyu Wang [2015-06-26]