Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

HoPaCI-DB

General information

URL: http://mips.helmholtz-muenchen.de/HoPaCI/
Full name: The Host-Pseudomonas and Coxiella Interaction database
Description: The host-Pseudomonas and Coxiella interaction database (HoPaCI-DB) is a publicly available manually curated integrative database of host-pathogen interaction data from Pseudomonas aeruginosa and Coxiella burnetii.
Year founded: 2014
Last update: NA
Version: v1.0
Accessibility:
Unaccessible
Country/Region: France

Classification & Tag

Data type:
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Contact information

University/Institution: Aix Marseille University
Address: 31 Chemin Joseph Aiguier, 13402 Marseille cedex 20, France
City: Marseille
Province/State:
Country/Region: France
Contact name (PI/Team): Andreas Ruepp
Contact email (PI/Helpdesk): andreas.ruepp@helmholtz-muenchen.de

Publications

24137008
HoPaCI-DB: host-Pseudomonas and Coxiella interaction database. [PMID: 24137008]
Bleves S, Dunger I, Walter MC, Frangoulidis D, Kastenmüller G, Voulhoux R, Ruepp A.

Bacterial infectious diseases are the result of multifactorial processes affected by the interplay between virulence factors and host targets. The host-Pseudomonas and Coxiella interaction database (HoPaCI-DB) is a publicly available manually curated integrative database (http://mips.helmholtz-muenchen.de/HoPaCI/) of host-pathogen interaction data from Pseudomonas aeruginosa and Coxiella burnetii. The resource provides structured information on 3585 experimentally validated interactions between molecules, bioprocesses and cellular structures extracted from the scientific literature. Systematic annotation and interactive graphical representation of disease networks make HoPaCI-DB a versatile knowledge base for biologists and network biology approaches.

Nucleic Acids Res. 2014:42(Database issue) | 16 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
4757/6895 (31.022%)
Interaction:
881/1194 (26.298%)
Health and medicine:
1198/1738 (31.128%)
4757
Total Rank
15
Citations
1.364
z-index

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Record metadata

Created on: 2015-06-20
Curated by:
Lina Ma [2018-07-03]
Chunlei Yu [2016-04-17]
Chunlei Yu [2016-03-31]
Mengwei Li [2016-02-19]
Chunlei Yu [2015-11-19]
Chunlei Yu [2015-06-28]