Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://sporeweb.molgenrug.nl/
Full name:
Description: An interactive journey through the complete sporulation cycle of Bacillus subtilis
Year founded: 2014
Last update: 2013-01-01
Version: v1.0
Accessibility:
Manual:
Accessible
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Country/Region: Netherlands

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Top Institute Food and Nutrition
Address: Nieuwe Kanaal 9A,6709 PA Wageningen,The Netherlands
City: Wageningen
Province/State:
Country/Region: Netherlands
Contact name (PI/Team): Robyn T. Eijlander
Contact email (PI/Helpdesk): R.T.Eijlander@rug.nl

Publications

24170806
SporeWeb: an interactive journey through the complete sporulation cycle of Bacillus subtilis. [PMID: 24170806]
Eijlander RT, de Jong A, Krawczyk AO, Holsappel S, Kuipers OP.

Bacterial spores are a continuous problem for both food-based and health-related industries. Decades of scientific research dedicated towards understanding molecular and gene regulatory aspects of sporulation, spore germination and spore properties have resulted in a wealth of data and information. To facilitate obtaining a complete overview as well as new insights concerning this complex and tightly regulated process, we have developed a database-driven knowledge platform called SporeWeb (http://sporeweb.molgenrug.nl) that focuses on gene regulatory networks during sporulation in the Gram-positive bacterium Bacillus subtilis. Dynamic features allow the user to navigate through all stages of sporulation with review-like descriptions, schematic overviews on transcriptional regulation and detailed information on all regulators and the genes under their control. The Web site supports data acquisition on sporulation genes and their expression, regulon network interactions and direct links to other knowledge platforms or relevant literature. The information found on SporeWeb (including figures and tables) can and will be updated as new information becomes available in the literature. In this way, SporeWeb offers a novel, convenient and timely reference, an information source and a data acquisition tool that will aid in the general understanding of the dynamics of the complete sporulation cycle.

Nucleic Acids Res. 2014:42(Database issue) | 27 Citations (from Europe PMC, 2024-04-20)

Ranking

All databases:
2655/6000 (55.767%)
Expression:
545/1143 (52.406%)
2655
Total Rank
27
Citations
2.7
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Record metadata

Created on: 2015-06-20
Curated by:
Lin Xia [2016-03-28]
Lin Xia [2015-06-28]