genome information of agricultural plants DB

e.g., human; SARS-CoV-2; lncRNA; single cell; spatial omics; immune; Oryza sativa; European Bioinformatics Institute;China

Database Profile

General information

URL:	http://nabic.naas.go.kr
Full name:	An online database for genome information of agricultural plants
Description:	The integrated-based database consists of multiple subsystems and provides a bioinformatics framework to study biological function based on the genomic sequences of rice, Chinese cabbage, rice mutant lines, and microorganisms. This database provides information through a user-friendly Web-interface from searching gene sequences to genome metabolism infrastructure analysis.
Year founded:	2012
Last update:
Version:
Accessibility:	Unaccessible
Country/Region:	Korea, Republic of

Classification & Tag

Data type:	DNA
Data object:	Plant
Database category:	Expression Gene genome and annotation
Major species:	Oryza sativa
Keywords:	Genome information Agricultural plants

Contact information

University/Institution:	National Academy of Agricultural Science
Address:	Genomics Division, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea
City:	Suwon
Province/State:
Country/Region:	Korea, Republic of
Contact name (PI/Team):	JangHo Hahn
Contact email (PI/Helpdesk):	jhhahn@rda.go.kr

Publications


23275706	An online database for genome information of agricultural plants. [PMID: 23275706] Kim C, Park D, Seol Y, Yoon U, Lee G, Hahn J. Abstract The integration-based genome database provides useful information through a user-friendly web interface that allows analysis of comparative genome for agricultural plants. We have concentrated on the functional bioinformatics of major agricultural resources, such as rice, Chinese cabbage, rice mutant lines, and microorganisms. The major functions are focused on functional genome analysis, including genome projects, gene expression analysis, gene markers with genetic map, analysis tools for comparative genome structure, and genome annotation in agricultural plants. AVAILABILITY: The database is available for free at http://nabic.naas.go.kr/ Bioinformation. 2012:8(21) \| 2 Citations (from Europe PMC, 2025-04-05)

An online database for genome information of agricultural plants. [PMID: 23275706]

Kim C, Park D, Seol Y, Yoon U, Lee G, Hahn J.

Abstract

The integration-based genome database provides useful information through a user-friendly web interface that allows analysis of comparative genome for agricultural plants. We have concentrated on the functional bioinformatics of major agricultural resources, such as rice, Chinese cabbage, rice mutant lines, and microorganisms. The major functions are focused on functional genome analysis, including genome projects, gene expression analysis, gene markers with genetic map, analysis tools for comparative genome structure, and genome annotation in agricultural plants.
AVAILABILITY: The database is available for free at http://nabic.naas.go.kr/

Bioinformation. 2012:8(21) | 2 Citations (from Europe PMC, 2025-04-05)

Showing 1 to 1 of 1 entries

All databases:

6054/6278 (3.584%)

Gene genome and annotation:

1741/1785 (2.521%)

Expression:

1178/1214 (3.048%)

6054

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0.167

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Record metadata

Created on: 2018-01-27

Curated by:

Pei Wang [2018-03-05]

Hao Zhang [2018-01-27]

Database Commons
a catalog of worldwide biological databases

a catalog of worldwide biological databases

Database Profile