Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

PlantGM

General information

URL: http://www.niab.go.kr/nabic/PlantGM
Full name:
Description: The Plant Genetic Map Database (PlantGM) has been developed as a web-based system which provides information about genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa). The database has three major parts and functions; (1) Map Search, (2) Marker Search, and (3) QTL Search. At present, the database provides characterization information for about 3258 genetic markers. It has 2800 RFLP and 112 QTL markers related to rice in addition to 321 RFLP and 25 PCR-based markers for Chinese cabbage. In addition, a genetic linkage map was also constructed by using 1,054 markers from 2,912 markers in rice.
Year founded: 2008
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: Korea, Republic of

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: National Institute of Agricultural Biotechnology
Address:
City:
Province/State:
Country/Region: Korea, Republic of
Contact name (PI/Team): Jang Ho Hahn
Contact email (PI/Helpdesk): jhhahn@rda.go.kr

Publications

Ranking

All databases:
5656/6278 (9.924%)
Gene genome and annotation:
1643/1785 (8.011%)
5656
Total Rank
6
Citations
0.375
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Created with Highcharts 10.0.0markersPlantGMgeneticdatabaseSearchriceChinesecabbageOryzasativaBrassicarapaMapprovidesinformationQTLRFLPaddition12PlantGM:PlantGeneticDatabasedevelopedweb-basedsystemthreemajorpartsfunctions;Marker3presentcharacterization32582800112related32125PCR-basedlinkagemapalsoconstructedusing054912rice.AVAILABILITY:availablefreehttp://www.niab.go.kr/nabic/PlantGM.

Record metadata

Created on: 2018-01-28
Curated by:
Dong Zou [2019-12-02]
Mengyu Pan [2018-09-21]
Mengyu Pan [2018-02-24]
Pei Wang [2018-01-27]