| URL: | http://www.circbase.org |
| Full name: | circBase |
| Description: | Thousands of circular RNAs (circRNAs) have recently been shown to be expressed in eukaryotic cells [Salzman et al. 2012, Jeck et al. 2013, Memczak et al. 2013, Salzman et al. 2013]. Here you can explore public circRNA datasets and download the custom python scripts needed to discover circRNAs in your own (ribominus) RNA-seq data. New: Sequence-based search Search the database by identifier, gene description, genomic position, or their lists. Retrieve dataset slices by defining a set of conditions (table browser). Export tables in a variety of formats. Export FASTA files containing genomic sequence. Please refer to documentation for further info. |
| Year founded: | 2014 |
| Last update: | July 2017 |
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| Accessibility: |
Accessible
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| Country/Region: | Germany |
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| University/Institution: | Max Delbrück Center for Molecular Medicine |
| Address: | Max Delbrück Center for Molecular Medicine, 13125 Berlin, Germany |
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| Country/Region: | Germany |
| Contact name (PI/Team): | Rajewsky N |
| Contact email (PI/Helpdesk): | rajewsky@mdc-berlin.de |