Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

DRTF

General information

URL: http://drtf.cbi.pku.edu.cn
Full name: a database of rice transcription factors
Description: DRTF contains 2025 putative transcription factors (TFs) in Oryza sativa L. ssp. indica and 2384 in ssp. japonica, distributed in 63 families, identified by computational prediction and manual curation. It includes detailed annotations of each TF including sequence features, functional domains, Gene Ontology assignment, chromosomal localization, EST and microarray expression information, as well as multiple sequence alignment of the DNA-binding domains for each TF family.
Year founded: 2006
Last update: 2017
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
Data object:
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Major species:
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Contact information

University/Institution: Peking University
Address: Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University Beijing 100871, People's Republic of China.
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Jingchu Luo
Contact email (PI/Helpdesk): drtf@mail.cbi.pku.edu.cn

Publications

Ranking

All databases:
1761/6275 (71.952%)
Raw bio-data:
126/554 (77.437%)
Structure:
221/872 (74.771%)
Interaction:
321/1052 (69.582%)
1761
Total Rank
97
Citations
5.389
z-index

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Record metadata

Created on: 2018-02-08
Curated by:
Yuanyuan Cheng [2023-09-20]
Meiye Jiang [2018-02-25]
Pei Wang [2018-02-08]