Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://www.thearkdb.org
Full name:
Description: The ArkDB database system aims to provide a comprehensive public repository for genome mapping data from farmed and other animal Species.
Year founded: 2001
Last update:
Version:
Accessibility:
Manual:
Accessible
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Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Edinburgh
Address:
City: Edinburgh
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): the Roslin Institute
Contact email (PI/Helpdesk): info@thearkdb.org

Publications

11125062
The ARKdb: genome databases for farmed and other animals. [PMID: 11125062]
Hu J, Mungall C, Law A, Papworth R, Nelson JP, Brown A, Simpson I, Leckie S, Burt DW, Hillyard AL, Archibald AL.

The ARKdb genome databases provide comprehensive public repositories for genome mapping data from farmed species and other animals (http://www.thearkdb.org) providing a resource similar in function to that offered by GDB or MGD for human or mouse genome mapping data, respectively. Because we have attempted to build a generic mapping database, the system has wide utility, particularly for those species for which development of a specific resource would be prohibitive. The ARKdb genome database model has been implemented for 10 species to date. These are pig, chicken, sheep, cattle, horse, deer, tilapia, cat, turkey and salmon. Access to the ARKdb databases is effected via the World Wide Web using the ARKdb browser and Anubis map viewer. The information stored includes details of loci, maps, experimental methods and the source references. Links to other information sources such as PubMed and EMBL/GenBank are provided. Responsibility for data entry and curation is shared amongst scientists active in genome research in the species of interest. Mirror sites in the United States are maintained in addition to the central genome server at Roslin.

Nucleic Acids Res. 2001:29(1) | 37 Citations (from Europe PMC, 2024-04-20)

Ranking

All databases:
3513/6000 (41.467%)
Raw bio-data:
282/539 (47.866%)
3513
Total Rank
37
Citations
1.609
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Record metadata

Created on: 2018-02-09
Curated by:
Lin Liu [2022-08-16]
Zhaohua Li [2018-02-23]
Pei Wang [2018-02-08]