Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

HESAS

General information

URL: http://www.primate.or.kr/HESAS
Full name: HERVs Expression and Structure Analysis System
Description: The human genome comprises approximately 8% by the HERVs (Human Endogenous RetroViruses) and other long terminal repeat (LTR) like elements. The HESAS (HERVs Expression and Structure Analysis System) database was developed to understand HERVs roles. The database shows expression and structure patterns by HERV elements located in 26,980 genes regions. The HERV expression patterns are indicated as exonization, contain, supply splicing donor, acceptor, TSS (transcriptional start site), and polyA signal. Genomic structure of HERV elements are predicted with retroviral genes (gag, pro, RT, Rnase, Intergrase, and env) by functional domain information and divided into 4 types according to the state of LTR truncation.
Year founded: 2005
Last update: 2004
Version:
Accessibility:
Accessible
Country/Region: Korea, Republic of

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Pusan National University
Address: PBBRC, Interdisciplinary Research Program of Bioinformatics, College of Natural Sciences, Pusan National University, Busan 609-735, Korea.
City: Busan
Province/State:
Country/Region: Korea, Republic of
Contact name (PI/Team): Heui-Soo Kim
Contact email (PI/Helpdesk): khs307@pusan.ac.kr

Publications

Ranking

All databases:
5032/6274 (19.812%)
Raw bio-data:
421/554 (24.188%)
Gene genome and annotation:
1484/1782 (16.779%)
5032
Total Rank
14
Citations
0.737
z-index

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Record metadata

Created on: 2018-02-10
Curated by:
Qi Wang [2018-02-17]