Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

ChEA3

General information

URL: https://amp.pharm.mssm.edu/ChEA3
Full name: ChIP-X Enrichment Analysis 3
Description: ChIP-X Enrichment Analysis 3 (ChEA3) is a transcription factor enrichment analysis tool that ranks TFs associated with user-submitted gene sets. The ChEA3 background database contains a collection of gene set libraries generated from multiple sources including TF–gene co-expression from RNA-seq studies, TF–target associations from ChIP-seq experiments, and TF–gene co-occurrence computed from crowd-submitted gene lists.
Year founded: 2019
Last update:
Version:
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
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Contact information

University/Institution: Icahn School of Medicine at Mount Sinai
Address: Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York, NY 10029, USA
City: New York
Province/State:
Country/Region: United States
Contact name (PI/Team): Avi Ma’ayan
Contact email (PI/Helpdesk): avi.maayan@mssm.edu

Publications

Ranking

All databases:
187/6274 (97.035%)
Gene genome and annotation:
72/1782 (96.016%)
Expression:
32/1213 (97.444%)
187
Total Rank
341
Citations
68.2
z-index

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Record metadata

Created on: 2019-10-27
Curated by:
Shoaib Saleem [2019-11-25]
Amjad Ali [2019-10-27]