Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

FoldamerDB

General information

URL: http://foldamerdb.ttk.hu
Full name:
Description: Foldamers are non-natural oligomers that mimic the structural behaviour of natural peptides, proteins and nucleotides by folding into a well-defined 3D conformation in solution. Since their first description about two decades ago, numerous studies have been undertaken dealing with the design, synthesis, characterization and application of foldamers. They have huge application potential as antimicrobial, anticancer and anti-HIV agents and in materials science. Despite their importance, there is no publicly available web resource providing comprehensive information on these compounds. Here we describe FoldamerDB, an open-source, fully annotated and manually curated database of peptidic foldamers. FoldamerDB holds the information about the sequence, structure and biological activities of the foldamer entries. It contains the information on over 1319 species and 1018 activities, collected from more than 160 research papers. The web-interface is designed to be clutter-free, user-friendly and it is compatible with devices of different screen sizes. The interface allows the user to search the database, browse and filter the foldamers using multiple criteria. It also offers a detailed help page to assist new users. FoldamerDB is hoped to bridge the gap in the freely available web-based resources on foldamers and will be of interest to diverse groups of scientists from chemists to biologists. The database can be accessed at http://foldamerdb.ttk.hu/.
Year founded: 2020
Last update:
Version:
Accessibility:
Accessible
Country/Region: Hungary

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Hungarian Academy of Sciences
Address: MTA TTK Lendület Biomolecular Self-Assembly Research Group, Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, H-1117 Budapest, Magyar Tudósok krt. 2, Hungary.
City:
Province/State:
Country/Region: Hungary
Contact name (PI/Team): Tamas Beke-Somfa
Contact email (PI/Helpdesk): beke-somfai.tamas@ttk.mta.hu

Publications

Ranking

All databases:
3638/6278 (42.068%)
Structure:
492/872 (43.693%)
Literature:
314/540 (42.037%)
3638
Total Rank
7
Citations
1.75
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Created with Highcharts 10.0.0FoldamerDBfoldamersdatabaseinformationapplicationpeptidicactivitiesavailableFoldamerDB:Foldamersnon-naturaloligomersmimicstructuralbehaviournaturalpeptidesproteinsnucleotidesfoldingwell-defined3DconformationsolutionSincefirstdescriptiontwodecadesagonumerousstudiesundertakendealingdesignsynthesischaracterizationhugepotentialantimicrobialanticanceranti-HIVagentsmaterialsscienceDespiteimportancepubliclywebresourceprovidingcomprehensivecompoundsdescribeopen-sourcefullyannotatedmanuallycuratedholdssequencestructurebiologicalfoldamerentriescontains1319species1018collected160researchpapersweb-interfacedesignedclutter-freeuser-friendlycompatibledevicesdifferentscreensizesinterfaceallowsusersearchbrowsefilterusingmultiplecriteriaalsooffersdetailedhelppageassistnew

Related Databases

Cited by

Record metadata

Created on: 2020-11-07
Curated by:
Lin Liu [2021-03-24]
Chang Liu [2020-11-23]
Chang Liu [2020-11-07]