Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: https://idrblab.org/covinter/
Full name: interaction data between coronavirus RNAs and host proteins
Description: This database is unique in (a) unambiguously characterizing the interactions between virus RNA and host protein, (b) comprehensively providing experimentally validated biological function for hundreds of host proteins key in viral infection and (c) systematically quantifying the differential expression patterns (before and after infection) of these key proteins.
Year founded: 2022
Last update: 2022
Version: 1
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: China

Contact information

University/Institution: Zhejiang University
Address: College of Pharmaceutical Sciences, The Second Affiliated Hospital, Zhejiang University School of Medicine, Zhejiang University, Hangzhou 310058, China
City: Hangzhou
Province/State: Zhejiang
Country/Region: China
Contact name (PI/Team): Feng Zhu
Contact email (PI/Helpdesk): 12019069@zju.edu.cn

Publications

36200814
CovInter: interaction data between coronavirus RNAs and host proteins. [PMID: 36200814]
Amahong K, Zhang W, Zhou Y, Zhang S, Yin J, Li F, Xu H, Yan T, Yue Z, Liu Y, Hou T, Qiu Y, Tao L, Han L, Zhu F.

Coronavirus has brought about three massive outbreaks in the past two decades. Each step of its life cycle invariably depends on the interactions among virus and host molecules. The interaction between virus RNA and host protein (IVRHP) is unique compared to other virus-host molecular interactions and represents not only an attempt by viruses to promote their translation/replication, but also the host's endeavor to combat viral pathogenicity. In other words, there is an urgent need to develop a database for providing such IVRHP data. In this study, a new database was therefore constructed to describe the interactions between coronavirus RNAs and host proteins (CovInter). This database is unique in (a) unambiguously characterizing the interactions between virus RNA and host protein, (b) comprehensively providing experimentally validated biological function for hundreds of host proteins key in viral infection and (c) systematically quantifying the differential expression patterns (before and after infection) of these key proteins. Given the devastating and persistent threat of coronaviruses, CovInter is highly expected to fill the gap in the whole process of the 'molecular arms race' between viruses and their hosts, which will then aid in the discovery of new antiviral therapies. It's now free and publicly accessible at: https://idrblab.org/covinter/.

Nucleic Acids Res. 2022:() | 4 Citations (from Europe PMC, 2024-04-20)

Ranking

All databases:
3197/6000 (46.733%)
Expression:
653/1143 (42.957%)
Interaction:
537/982 (45.418%)
3197
Total Rank
4
Citations
2
z-index

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Record metadata

Created on: 2023-01-07
Curated by:
Lina Ma [2023-01-09]
KURBANSA AMAHONG [2023-01-07]