Gene Expression Nebulas
A data portal of transcriptomic profiles analyzed by a unified pipeline across multiple species

Gene Expression Nebulas

A data portal of transcriptome profiles across multiple species

GEND000148: A single cell transcriptome atlas of myeloid blood cell lineages in Drosophila [scRNA-seq]

BioProject ID:    PRJNA592992     Original Project ID:    GSE141273    

Strategy:
Species:
Tissue:
Healthy Condition:
Cell Number:
Biological Context:
Baseline:
No
Genetic:
-
Phenotypic:
-
Environmental:
Biotic stress
Spatial:
Tissue
Temporal:
Time series
Quality and Quantity:
RNA Type:
poly(A)+ RNA
Median Mapping Quality:
0.86215
Median Coverage:
1.28
Max Sequencing Length:
50
#Max Replicate:
5

Transcriptomic Profiles

Note:
GENDX:
Gene Expression Profiles
GENDE:
RNA Editing Profiles
GENDS:
Alternative Splicing Profiles
GENDC:
CircRNA Expression Profiles
ID: GENDX000148 Download
Reference Genome: BDGP6.28.101
Genome Annotation: BDGP6.28.101
Data Processing:
  1. Extraction of cell barcodes: dropTag
  2. Read mapping: STAR v2.7.1a
  3. Data generation: dropEst

Samples

Display Columns
Basic Information:
Sample Characteristic:
Biological Condition:
Experimental Variables:
Protocol:
Sequencing:
Assessing Quality:
Analysis: