Dataset - GEND000254 - Gene Expression Nebulas

A data portal of transcriptomic profiles analyzed by a unified pipeline across multiple species

A data portal of transcriptome profiles across multiple species

BioProject ID: PRJNA385135 Original Project ID: GSE98455

Strategy:	Bulk RNA-seq
Species:	Oryza sativa
Tissue:	Shoot
Isolation_source:	70 ℃
Biological Context:	Baseline: No Genetic: Natural variation Phenotypic: - Environmental: Abiotic stress Spatial: Tissue Temporal: -
Quality and Quantity:	RNA Type: poly(A)+ RNA Median Mapping Quality: 0.9843 Median Coverage: 4.17 Max Sequencing Length: 100 #Max Replicate: 2

Note:

GENDX:

Gene Expression Profiles

GENDE:

RNA Editing Profiles

GENDS:

Alternative Splicing Profiles

GENDC:

CircRNA Expression Profiles

ID: GENDX000254 Download

Reference Genome: IRGSP-1.0.47

Genome Annotation: IRGSP-1.0.47

Data Processing:

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GEN Sample ID	BioSample ID	Tissue	Cell Type	Cell Line	Disease	Case Detail	Control Detail	Strategy

GENS00035295	SAMN06860861	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq
GENS00035294	SAMN06860862	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq
GENS00035293	SAMN06860785	Shoot	-	-	-	-	No salt treatment	Bulk RNA-seq
GENS00035292	SAMN06860792	Shoot	-	-	-	-	No salt treatment	Bulk RNA-seq
GENS00035291	SAMN06860793	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq
GENS00035290	SAMN06860794	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq
GENS00035289	SAMN06860795	Shoot	-	-	-	-	No salt treatment	Bulk RNA-seq
GENS00035288	SAMN06860796	Shoot	-	-	-	-	No salt treatment	Bulk RNA-seq
GENS00035287	SAMN06860797	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq
GENS00035286	SAMN06860798	Shoot	-	-	-	Eight day old rice seedlings were subjected to a gradual 6 dS·m-1 salt stress for a period of 24h.	-	Bulk RNA-seq

Showing 1 to 10 of 368 entries (filtered from 59,339 total entries)

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