Gene Expression Nebulas
A data portal of transcriptomic profiles analyzed by a unified pipeline across multiple species

Gene Expression Nebulas

A data portal of transcriptome profiles across multiple species
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GEND000442
Basic Information Samples Transcriptomic Profiles Visualization

GEND000442: Modified Vaccinia Ankara Vector-Based Vaccine Protects Macaques from SARS-CoV-2 Infection, Immune Pathology and Dysfunction in the Lung

BioProject ID:    PRJNA695575     Original Project ID:    GSE165747    

Strategy:
Species:
Macaca mulatta
Tissue:
Healthy Condition:
Cell Type:
Cell Line:
Development Stage:
Cell Number:
Biological Context:
Baseline:
No
Genetic:
-
Phenotypic:
Disease; Infection
Environmental:
Biotic Stress
Spatial:
Tissue
Temporal:
-
Quality and Quantity:
RNA Type:
Poly(A)+ RNA
Median Mapping Quality:
0.793
Median Coverage:
0.00
Max Sequencing Length:
117
#Max Replicate:
2

Transcriptomic Profiles

Note:
GENDX:
Gene Expression Profiles
GENDE:
RNA Editing Profiles
GENDS:
Alternative Splicing Profiles
GENDC:
CircRNA Expression Profiles
ID: GENDX000442 Download
Reference Genome: Macaca_mulatta.Mmul_10
Genome Annotation: Macaca_mulatta.Mmul_10
Data Processing:
  1. cellranger count --id=${id} --sample=${path}/${id} --transcriptome=${ref} --fastqs=${path}/${id} --localcores=$thread --localmem=64

Samples

Display Columns
Basic Information:
Sample Characteristic:
Biological Condition:
Experimental Variables:
Protocol:
Sequencing:
Assessing Quality:
Analysis: