Growth Protocol:	Rice genotypes IR24 (susceptible), and IRBB67 (Xa4+Xa7) seeds were pre-germinated for 4 days at 37°C and transferred in pot for further growth under greenhouse conditions (12h light and 12h dark). Two weeks old healthy plants were then transferred into indoor growth chambers under two temperature regimes (29/21 °C and 35/31 °C; day/night temperatures) and 70% of relative humidity and inoculated at 21 days old. Philippines Xoo race 7, strain PXO145 (avrXa4+avrXa7) inoculums was prepared from 3 days old culture. Seedling of IR24 and IRBB67 at 21 days old were syringe needless inoculated with PXO145 and sterilized demineralized water (Mock) for RNA-Seq gene expression analysis. Leaf at the second position of the main tiller was inoculated and leaves were sampled at 3, 72 and 120 hours post inoculation (hpi). A pulled leaves from 5 plants for each rice genotype treatment at each time point and immediately frozen in liquid nitrogen, and stored at -80°C until total RNA extraction.
Treatment Protocol:	Twenty-one day-old seedlings of IR24, IRBB4, IRBB7 and IRBB67 were inoculated by the leaf clipping method78 while IR24 and IRBB67 plants were inoculated at 3 points of infiltration using syringe needless with PXO145 and with sterilized demineralized water (mock).
Extract Protocol:	Total RNA was extracted from syringe needless inoculated leaves using TRIzol Reagent (Invitrogen, Carlsbad, CA, USA) following the manufacturer protocol. Total RNA was then treated with DNase (Promega) and quantified using NanoDrop. RNA integrity was checked using an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). For each time point and condition, two biological replicates and cleaned total RNA.
Library Construction Protocol:	Libraries were prepared according to Illumina's instructions. Briefly, Single-end fragment library of 100bp length was generated from cleaned total RNA following the TruSeq RNA Sample Preparation kit. Cluster generation of the produced libraries was performed using Illumina_ TruSeq SR Cluster Kit v3 - cBot - HS, and sequenced on a HiSeq 2000 platform (Illumina) with single-end 100-bp reads.

Molecule Type:	poly(A)+ RNA
Library Source:
Library Layout:	SINGLE
Library Strand:	-
Platform:	ILLUMINA
Instrument Model:	Illumina HiSeq 2000
Strand-Specific:	Unspecific

Data Resource	GEN Sample ID	GEN Dataset ID	Project ID	BioProject ID	Sample ID	Sample Name	BioSample ID	Sample Accession	Experiment Accession	Release Date	Submission Date	Update Date	Species	Race	Ethnicity	Age	Age Unit	Gender	Source Name	Tissue	Cell Type	Cell Subtype	Cell Line	Disease	Disease State	Development Stage	Mutation	Phenotype	Case Detail	Control Detail	Growth Protocol	Treatment Protocol	Extract Protocol	Library Construction Protocol	Molecule Type	Library Layout	Strand-Specific	Library Strand	Spike-In	Strategy	Platform	Instrument Model	Cell Number	Reads Number	Gbases	AvgSpotLen1	AvgSpotLen2	Uniq Mapping Rate	Multiple Mapping Rate	Coverage Rate