HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000031

Dataset Information

Omics:
Single cell RNA-seq
Omics Detail:
10x Genomics
Species:
Human
Organ:
Fetal liver
Cell Number:
1448
Gene Number:
25779
Genome Reference:
GRCh38
Data Normalization:
SCT
Sequencing Platform:
HiSeq4000 and NovaSeq6000
Cell Sorting Strategies:
CD34+ or CD45+ cells

Publication

Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Human Developmental Hematopoiesis.

Ranzoni AM, Tangherloni A, Berest I, Riva SG, Myers B, Strzelecka PM, Xu J, Panada E, Mohorianu I, Zaugg JB, Cvejic A.
Volume:28 Issue:3 Cell stem cell | 2020-12-21 | [33352111]

Visualization

Annotation

Gene Expression (Feature plot)

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Gene Expression (Violin plot)

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Gene Expression (Dot plot)

Differentially Expressed Genes

Species Dataset Gene P.value logFC adj.P.val Stage Cell type Cluster

GO Enrichment

Cell Interaction

Species Stage Dataset Source Target Communication probability P value Ligand Receptor Interact Name