Dataset - HemAtlas

HemAtlas

HemSC00000047

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Human

Organ:

Fetal liver

Cell Number:

13064

Gene Number:

28547

Genome Reference:

GRCh38

Data Normalization:

SCT

Sequencing Platform:

Illumina NovaSeq 6000 system

Cell Sorting Strategies:

CD31+ and/or CD34+ haemato-vascular cells were enriched for scRNA-seq by FACS sorting

Publication

Mapping human haematopoietic stem cells from haemogenic endothelium to birth.

Calvanese V, Capellera-Garcia S, Ma F, Fares I, Liebscher S, Ng ES, Ekstrand S, Aguadé-Gorgorió J, Vavilina A, Lefaudeux D, Nadel B, Li JY, Wang Y, Lee LK, Ardehali R, Iruela-Arispe ML, Pellegrini M, Stanley EG, Elefanty AG, Schenke-Layland K, Mikkola HKA.
Volume:604 Issue:7906 Nature | 2022-04-13 | [35418685]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000047

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000047

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models