Dataset - HemAtlas

HemAtlas

HemSC00000063

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Mouse

Organ:

AGM (aorta-gonad-mesonephros)

Cell Number:

7718

Gene Number:

17211

Genome Reference:

mm10

Data Normalization:

SCT

Sequencing Platform:

10x Genomics

Cell Sorting Strategies:

40,000 and 70,000 CD31+Ter119–CD16/32– cells, respectively, from C56BL/6J wild-type mouse E10 (28 embryos used) and E11 AGM (20 embryos used)

Publication

Single-cell omics identifies inflammatory signaling as a trans-differentiation trigger in mouse embryos.

Zhang Y, Kang Z, Liu M, Wang L, Liu F.
Volume:59 Issue:8 Developmental cell | 2024-03-19 | [38508181]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000063

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000063

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models