Dataset - HemAtlas

HemAtlas

HemSC00000065

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Zebrafish

Organ:

KM (kidney marrow)

Cell Number:

8763

Gene Number:

22004

Genome Reference:

GRCz11

Data Normalization:

SCT

Sequencing Platform:

10x Genomics

Cell Sorting Strategies:

PBS-administered leukocyte from zebrafish kidney marrow

Publication

Single-cell RNA sequencing unveils the hidden powers of zebrafish kidney for generating both hematopoiesis and adaptive antiviral immunity.

Hu C, Zhang N, Hong Y, Tie R, Fan D, Lin A, Chen Y, Xiang LX, Shao JZ.
Volume:13 Issue: eLife | 2024-03-18 | [38497789]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000065

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000065

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models