Dataset - HemAtlas

HemAtlas

HemSC00000081

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Human

Organ:

Bone marrow

Cell Number:

25067

Gene Number:

32802

Genome Reference:

GRCh38

Data Normalization:

SCT

Sequencing Platform:

10x Genomics

Cell Sorting Strategies:

the non-hematopoietic cell-containing CD45low/-CD235a- population from healthy donors

Publication

Identification of phenotypically, functionally, and anatomically distinct stromal niche populations in human bone marrow based on single-cell RNA sequencing.

Li H, Bräunig S, Dhapolar P, Karlsson G, Lang S, Scheding S.
Volume:12 Issue: eLife | 2023-03-06 | [36876630]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000081

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000081

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models