API

Function	URL Pattern	Method	Example
Gene search	https://ngdc.cncb.ac.cn/ic4r/api/json/gene/[LOCUS]	GET	https://ngdc.cncb.ac.cn/ic4r/api/json/gene/IC4R-OSJ01G000600
Function Annotation Search	https://ngdc.cncb.ac.cn/ic4r/api/json/annotation/[LOCUS]	GET	https://ngdc.cncb.ac.cn/ic4r/api/json/annotation/IC4R-OSJ01G000600
Circular RNA Search	https://ngdc.cncb.ac.cn/ic4r/api/json/circRNA/[LOCUS]	GET	https://ngdc.cncb.ac.cn/ic4r/api/json/circRNA/IC4R-OSJ01Circ057100
Long non-coding RNA Search	https://ngdc.cncb.ac.cn/ic4r/api/json/lncRNA/[LOCUS]	GET	https://ngdc.cncb.ac.cn/ic4r/api/json/lncRNA/IC4R-OSJ01Lnc000600.1
ID Conversion	https://ngdc.cncb.ac.cn/ic4r/api/json/idConversion/[LOCUS]	GET	https://ngdc.cncb.ac.cn/ic4r/api/json/idConversion/IC4R-OSJ01G000600

Expression
JSON API
Function	URL pattern	Method	Example
Expression profiles for gene	https://ngdc.cncb.ac.cn/red/api/fpkm?gene=[GENE_ACCESSION]	GET	https://ngdc.cncb.ac.cn/red/api/fpkm?gene=Os06g0651900
Expression profiles for transcript	https://ngdc.cncb.ac.cn/red/api/fpkm?transcript=[TRANSCRIPT_ACCESSION]	GET	https://ngdc.cncb.ac.cn/red/api/fpkm?transcript=Os06t0324800-01
Embed
`<iframe src="https://ngdc.cncb.ac.cn/red/expression-api?term=[GENE_ACCESSION]" width='100%' height='600px' style='oveflow:hidden;border:none' />`

Homolog
JSON API
Function	URL pattern	Method	Example
Gene information	https://ngdc.cncb.ac.cn/ic4r/genes/[GENE_ACCESSION].json	GET	http://homolog.ic4r.org/genes/Os01g0100200.json
Group information	https://ngdc.cncb.ac.cn/ic4r/groups/[GROUP_ACCESSION].json	GET	http://homolog.ic4r.org/genes/PHG-00015.json

Post-Translational Modification
JSON API
Function	URL pattern	Method	Example
Basic information	http://dbppt.biocuckoo.org/getPage.php?seqID=[DBPPT_ID]	GET	http://dbppt.biocuckoo.org/getJSON.php?seqID=Q9C958
Ubiquitin and ubiquitin-like conjugation	http://uucd.biocuckoo.org/getJSON.php?gid=[LOC_ACCESSION]	GET	http://uucd.biocuckoo.org/getJSON.php?gid=LOC_Os06g30970