IC4R Information Commons for Rice

IC4R-OSJ10G017400

Gene Summary

Gene Accession IC4R-OSJ10G017400
Symbol ZRP4
ID Mapping LOC_Os10g02880,Os10g0118200
Gene Description O-Methyltransferase
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 4084
Chromosome Chromosome 10
Location 1160409:1164493
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0005515 Molecular Function protein binding
GO:0032259 Biological Process Methylation
GO:0030187 Biological Process Melatonin Biosynthetic Process
GO:0017096 Molecular Function Acetylserotonin O-Methyltransferase Activity
GO:0008171 Molecular Function O-Methyltransferase Activity
GO:0046983 Molecular Function Protein Dimerization Activity
GO:0008168 Molecular Function Methyltransferase Activity
GO:0005829 Cellular Component cytosol
GO:0005737 Cellular Component cytoplasm
GO:0009987 Biological Process cellular process
GO:0008152 Biological Process metabolic process
GO:0016740 Molecular Function transferase activity
Plant Ontology
PO:0009005 Plant Anatomy root
PO:0025034 Plant Anatomy leaf
PO:1000526 Others etiolated leaf
PO:1000518 Others seedling development stage
Environment Ontology
EO:0007237 Others normal temperature regimen
EO:0007270 Others continuous dark (no light) regimen
EO:0007319 Others warm/hot air temperature regimen
EO:1000324 Others chlorophyll a
Trait Ontology
TO:0000599 Others enzyme activity
TO:1000581 Others N-acetylserotonin methyltransferase activity

Functional Annotation

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Functional Categories
ID
Description
No matching records found

Transcripts

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mRNA ID
mRNA Length
GC Content
purine Content
CDS Length
CDS Sequence
Protein ID
Protein Length
Protein Sequence
No matching records found

RNA-Seq Evidence

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Run ID
Layout
Bases (MB)
Spots (Millions)
Tissues
Description
Release Date
No matching records found

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
9.07554 2.979309 55.587255 0.0 1.644626 0.885953049 16
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

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