ICG00205 Gluconacetobacter diazotrophicus - Internal Control Genes Database (ICG)

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Gluconacetobacter diazotrophicus

Accession: ICG00205

Latin Name: Gluconacetobacter diazotrophicus

Common Name: -

Taxonomy ID: 33996

Description: Gluconacetobacter diazotrophicus strain PAL5 is a nitrogen-fixing endophytic bacterium originally isolated from sugarcane and later on was found to colonize other plants such as rice, elephant grass, sweet potato, coffee, and pineapple. Currently, G. diazotrophicus has been considered a plant growth-promoting bacterium due to its characteristics of biological nitrogen fixation, phytohormone secretion, solubilization of mineral nutrients and antagonism to phytopathogens.

ICG00205-1

Culture Conditions

Internal Control Genes

Gene Symbol	Gene Model	Application Scenario	Accession Number	Primers(5' - 3') (Forward/Reverse)	Size (bp)	Annealing Temperature	Detection
rho	Rhodopsin	Lgi Medium	NM_003134	F: GCAACTCGGAACTCATCCTC R: GGACCCACATCTTCGACAGT	132	58	SYBR
23S rRNA	23S Ribosomal RNA	Lgi Medium	NM_003135	F: GTGAGACAGTTCGGTCCCTATC R: CGATTATCCCGTCCAGACTTAG	150	58	SYBR
rpoD	RNA Polymerase	Lgi Medium	NM_003136	F: ACAACGACACCACTCTGCTG R: CTCCGACGACATCTGATCCT	131	58	SYBR

Molecular Types:

mRNA

Evaluation Methods

geNorm

NormFinder

Contact

Name: Jean L. Simões-Araújo

Email: jean@cnpab.embrapa.br

Institution: Laboratório de Genética e Bioquímica, Embrapa Agrobiologia, Seropédica, RJ, Brazil

Basic Information

Gene Summary