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Basic Information:
Sample Characteristic:
Biological Condition:
Protocol:
Assessing Quality:
Analysis:
Action:
Filter by Quality Assessment
| Sample Name | Description | Project ID | Sample ID | Species | Tissue/Cell Line | Quality Assessment | View In JBrowse | CpG Island |
|---|---|---|---|---|---|---|---|---|
| - | - | - |
Sample Name | Description | Project ID | Sample ID | Species | Tissue/Cell Line | Quality Assessment | View In JBrowse | CpG Island |
|---|---|---|---|---|---|---|---|---|
- | - | - | ||||||
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Quality Assessment
Quality control is performed based on criteria listed in the table. The green
represents “pass”, while the red represents “fail”. Mouse-over to view details.
In the Samples
interface, you can enter customized cut off values to filter samples that meet the criteria.
| Mapping rate | Unique mapping rate | Genome coverage | Cytosine Coverage | Conversion rate | Mapped Read Depth | |
|---|---|---|---|---|---|---|
| Green | >= 80% | >= 65% | >= 80% | >= 80% | >= 99.5% | >= 20 |
| Red | < 80% | < 65% | < 80% | < 80% | < 99.5% | < 20 |