EPI_ISL_403962

基因组信息

病毒株名 hCoV-19/Thailand/61/2020
序列号 EPI_ISL_403962
宿主 Homo sapiens
数据来源 GISAID
采样日期 2020-01-08
采样地点 Thailand/ Nonthaburi Province
相关ID
谱系 B (Version: 4.0.6)
序列完整度 Complete
质量评估 0/0/0/0/NO
样本提供单位 Department of Medical Sciences, Ministry of Public Health, Thailand; Thai Red Cross Emerging Infectious Diseases - Health Science Centre; Department of Disease Control, Ministry of Public Health, Thailand
数据递交单位 Department of Medical Sciences, Ministry of Public Health, Thailand; Thai Red Cross Emerging Infectious Diseases - Health Science Centre; Department of Disease Control, Ministry of Public Health, Thailand
发布时间 2020-01-20 12:04:48

临床信息

年龄 60
性别 F
职业 NA
发作日期 2020-01-05
入院日期 2020-01-08
旅行史/接触史 The patient went to a local health facility in China and received undisclosed medication on 2020/1/5. She had not visited the Huanan Seafood Market but she was living near another local market, which she visited daily until illness onset
严重程度 NA
病患状态 Fever (38.6 ℃), a runny nose, sore throat, no dyspnea, no diarrhoea
临床症状及潜伏天数 Fever with chills, sore throat and headache on 2020/1/5, and fever (38.6 ℃) on 2020/1/8
临床检测 complete blood /respiratory tract secretions /sputum /inconspicuous lung sounds /CXR /a conventional nested RT-PCR
基础病史 Upon admission, her vital signs were normal except for elevated blood pressure
其他病原菌感染 NA
合并症 NA
临床用药和处理 NA
生理生化指标追踪 Conventional nested RT-PCR, CXR, complete blood count
出院日期 2020-01-18
相关文献 Early transmission patterns of coronavirus disease 2019 (COVID-19) in travellers from Wuhan to Thailand, January 2020. [PMID: 32127124]

基因组变异统计

参考序列 2019-nCoV (MN908947.3)
病毒株名 hCoV-19/Thailand/61/2020 (EPI_ISL_403962)
SNP数目 0
Insertion数目 0
Deletion数目 2
Indel数目 0
相似度 99.99
质量评估分级 A
注释统计 2(intergenic_variant:2)
文件下载 (GFF3)
The variation information in this file was calculated based on sequence EPI_ISL_403962.The original sequence can be obtained from GISAID's website.