GWHABKF00000001

基因组信息

病毒株名 BetaCoV/Wuhan/IPBCAMS-WH-01/2019
序列号 GWHABKF00000001
宿主 Homo sapiens
数据来源 Genome Warehouse
采样日期 2019-12-24
采样地点 China / Hubei / Wuhan
相关ID EPI_ISL_402123,MT019529.1
谱系 B (Version: 4.0.6)
序列完整度 Complete
质量评估 0/0/0/3/NO
样本提供单位 Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College; Vision Medicals Co., Ltd
数据递交单位 Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College; Vision Medicals Co., Ltd
发布时间 2020-01-26 09:26:18

临床信息

年龄 65
性别 M
职业 Vendor at the Huanan Seafood Market
发作日期 2019-12-15
入院日期 2019-12-18
旅行史/接触史 Worked in the market
严重程度 Serious
病患状态 Hospitalized
临床症状及潜伏天数 The patient had a high fever (39.3 ℃) and cough, with little sputum production at the onset of illness. He had a continuous fever and developed severe shortness of breath 16 days later
临床检测 Number of white blood cells/Number of neutrophils/Number of lymphocytes/Number of platelets/Prothrombin time/APTT/D-dimer/ALT/Serum potassium/Serum creatine/Procalcitonin
基础病史 NA
其他病原菌感染 NA
合并症 Acute respiratory distress syndrome and secondary infections
临床用药和处理 Antibiotic therapy, ECMO, Mechanical ventilation
生理生化指标追踪 The lymphocyte counts were generally low. The alanine aminotransferase and serum creatine levels were increased
出院日期 NA
相关文献 Identification of a novel coronavirus causing severe pneumonia in human: a descriptive study. [PMID: 32004165]

基因组变异统计

参考序列 2019-nCoV (MN908947.3)
病毒株名 BetaCoV/Wuhan/IPBCAMS-WH-01/2019 (GWHABKF00000001)
SNP数目 3
Insertion数目 0
Deletion数目 1
Indel数目 0
相似度 99.99
质量评估分级 A
注释统计 4(intergenic_variant:1; synonymous_variant:1; missense_variant:2)
文件下载 (GFF3)