Genome Sequences
Language / 语言
| Virus Strain Name | BetaCoV/Wuhan/WH19004/2020 |
| Accession ID | NMDC60013002-09 |
| Host | Homo sapiens |
| Data Source | NMDC |
| Sample Collection Date | 2020-01-01 |
| Location | China / Hubei / Wuhan |
| Related ID | |
| Lineage | B (Version: 4.0.6) |
| Nuc.Completeness | Complete |
| Quality Assessment | 0/0/0/2/NO |
| Originating Lab | China CDC; Shandong First Medical University & Shandong Academy of Medical Sciences; Hubei Provincial Center for Disease Control and Prevention; BGI PathoGenesis Pharmaceutical Technology Co., Ltd |
| Submitting Lab | China CDC; Shandong First Medical University & Shandong Academy of Medical Sciences; Hubei Provincial Center for Disease Control and Prevention; BGI PathoGenesis Pharmaceutical Technology Co., Ltd |
| Create Date | 2020-02-02 03:22:10 |
| Age | NA |
| Gender | NA |
| Occupation | NA |
| Onset Date | NA |
| Admission date | NA |
| Travel history/ Contact history | The patient had visited to the seafood wholesale market |
| Severity of illness | NA |
| Patient Status | NA |
| Clinical symptoms and latent days | NA |
| Clinical tests | BALF |
| Chronic Medical Illness | NA |
| Co-infection with other respiratory pathogens | NA |
| Comorbid conditions | NA |
| Clinical medication and treatment | NA |
| Physiological and biochemical indicators | NA |
| Discharge date | NA |
| Related publication | Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding. [PMID: 32007145] |
| Reference | 2019-nCoV (MN908947.3) |
| Virus Strain Name | BetaCoV/Wuhan/WH19004/2020 (NMDC60013002-09) |
| SNP No. | 2 |
| Insertion No. | 0 |
| Deletion No. | 1 |
| Indel No. | 0 |
| Similarity | 99.99 |
| Quality Assessment Grade | A |
| Annotation Statistics | 3(intergenic_variant:1; synonymous_variant:1; missense_variant:1) |
| File Download (GFF3) |
| Variant ID | Ref | Alt | Gene Codons | Protein Amino Acid Change |
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