Genome Sequences
Language / 语言
| Virus Strain Name | BetaCoV/Wuhan/IVDC-HB-04/2020 |
| Accession ID | NMDC60013085-01 |
| Host | Homo sapiens |
| Data Source | NMDC |
| Sample Collection Date | 2020-01-01 |
| Location | China / Hubei / Wuhan |
| Related ID | EPI_ISL_402120 |
| Lineage | B (Version: 4.0.6) |
| Nuc.Completeness | Complete |
| Quality Assessment | 0/0/0/2/NO |
| Originating Lab | National Institute for Viral Disease Control and Prevention, China CDC |
| Submitting Lab | National Institute for Viral Disease Control and Prevention, China CDC |
| Create Date | 2020-01-20 12:04:48 |
| Age | 61 |
| Gender | M |
| Occupation | NA |
| Onset Date | 2019-12-20 |
| Admission date | 2019-12-27 |
| Travel history/ Contact history | A frequent visitor to the seafood wholesale market |
| Severity of illness | Serious |
| Patient Status | Died |
| Clinical symptoms and latent days | The patient was initially reported fever and cough on 2019/12/20, and respiratory distress developed 7 days after the onset of illness and worsened over the next 2 days |
| Clinical tests | Immunohistochemical analysis, detection of IgM and IgG antiviral antibodies in the serum samples from a patient at two time points, Chest Radiographs |
| Chronic Medical Illness | NA |
| Co-infection with other respiratory pathogens | NA |
| Comorbid conditions | NA |
| Clinical medication and treatment | NA |
| Physiological and biochemical indicators | NA |
| Discharge date | NA |
| Related publication | A Novel Coronavirus from Patients with Pneumonia in China, 2019. [PMID: 31978945] |
| Reference | 2019-nCoV (MN908947.3) |
| Virus Strain Name | BetaCoV/Wuhan/IVDC-HB-04/2020 (NMDC60013085-01) |
| SNP No. | 2 |
| Insertion No. | 0 |
| Deletion No. | 1 |
| Indel No. | 0 |
| Similarity | 99.99 |
| Quality Assessment Grade | A |
| Annotation Statistics | 3(intergenic_variant:1; synonymous_variant:1; missense_variant:1) |
| File Download (GFF3) |
| Variant ID | Ref | Alt | Gene Codons | Protein Amino Acid Change |
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