Hir proteins are required for position-dependent gene silencing in Saccharomyces cerevisiae in the absence of chromatin assembly factor I.

P D Kaufman, J L Cohen, M A Osley
Author Information
  1. P D Kaufman: Lawrence Berkeley National Laboratory and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720-3206, USA. pdkaufman@1bl.gov

Abstract

Chromatin assembly factor I (CAF-I) is a three-subunit histone-binding complex conserved from the yeast Saccharomyces cerevisiae to humans. Yeast cells lacking CAF-I (cacDelta mutants) have defects in heterochromatic gene silencing. In this study, we showed that deletion of HIR genes, which regulate histone gene expression, synergistically reduced gene silencing at telomeres and at the HM loci in cacDelta mutants, although hirDelta mutants had no silencing defects when CAF-I was intact. Therefore, Hir proteins are required for an alternative silencing pathway that becomes important in the absence of CAF-I. Because Hir proteins regulate expression of histone genes, we tested the effects of histone gene deletion and overexpression on telomeric silencing and found that alterations in histone H3 and H4 levels or in core histone stoichiometry reduced silencing in cacDelta mutants but not in wild-type cells. We therefore propose that Hir proteins contribute to silencing indirectly via regulation of histone synthesis. However, deletion of combinations of CAC and HIR genes also affected the growth rate and in some cases caused partial temperature sensitivity, suggesting that global aspects of chromosome function may be affected by the loss of members of both gene families.

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Grants

  1. R01 GM040118/NIGMS NIH HHS
  2. R01 GM055712/NIGMS NIH HHS
  3. GM40118/NIGMS NIH HHS
  4. GM55712/NIGMS NIH HHS

MeSH Term

Amino Acid Sequence
Chromatin
Chromatin Assembly Factor-1
Chromosomal Proteins, Non-Histone
DNA-Binding Proteins
Fungal Proteins
Gene Dosage
Gene Expression Regulation, Fungal
Histones
Humans
Molecular Sequence Data
Mutagenesis
Nuclear Proteins
Repetitive Sequences, Nucleic Acid
Repressor Proteins
Saccharomyces cerevisiae
Saccharomyces cerevisiae Proteins
Sequence Homology, Amino Acid
Telomere

Chemicals

Chromatin
Chromatin Assembly Factor-1
Chromosomal Proteins, Non-Histone
DNA-Binding Proteins
Fungal Proteins
HIR1 protein, S cerevisiae
HIR2 protein, S cerevisiae
Histones
Nuclear Proteins
Repressor Proteins
Saccharomyces cerevisiae Proteins

Word Cloud

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