Assays for nucleosome positioning in yeast. - National Genomics Data Center (CNCB-NGDC)

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Assays for nucleosome positioning in yeast.

M P Ryan, G A Stafford, L Yu, K B Cummings, R H Morse

Author Information

M P Ryan: Wadsworth Center, New York State Department of Health, Albany 12208, USA.

PMID: 10372372 DOI: 10.1016/s0076-6879(99)04023-9

No abstract text available.

GMS51993/NIGMS NIH HHS

ATP-Binding Cassette Transporters

Cell Fractionation

Chromatin

Chromosome Mapping

DNA Primers

DNA, Fungal

Deoxyribonuclease I

Electrophoresis, Polyacrylamide Gel

Fungal Proteins

Glycoproteins

Indicators and Reagents

Nucleosomes

Phosphorus Radioisotopes

Restriction Mapping

Saccharomyces cerevisiae

Saccharomyces cerevisiae Proteins

Spheroplasts

ATP-Binding Cassette Transporters

Chromatin

DNA Primers

DNA, Fungal

Fungal Proteins

Glycoproteins

Indicators and Reagents

Nucleosomes

Phosphorus Radioisotopes

STE6 protein, S cerevisiae

Saccharomyces cerevisiae Proteins

Deoxyribonuclease I

Journal Article Research Support, U.S. Gov't, P.H.S.

Perfect and imperfect nucleosome positioning in yeast.Evaluation of DNA intramolecular interactions for nucleosome positioning in yeast.Nucleoprotein gel assays for nucleosome positioning and mobility.Genome-wide DNA sequence polymorphisms facilitate nucleosome positioning in yeast.Nucleosome-positioning sequence repeats impact chromatin silencing in yeast minichromosomes.NCS: incorporating positioning data to quantify nucleosome stability in yeast.Chromatin folding modulates nucleosome positioning in yeast minichromosomes.Predicting nucleosome positioning using statistical equilibrium models in budding yeast.A genome-wide comprehensive analysis of nucleosome positioning in yeast.Nucleosome Positioning.

Roles of chromatin remodeling factors in the formation and maintenance of heterochromatin structure.Asymmetric positioning of nucleosomes and directional establishment of transcriptionally silent chromatin by Saccharomyces cerevisiae silencers.The effect of micrococcal nuclease digestion on nucleosome positioning data.Molecular genetic analysis of the yeast repressor Rfx1/Crt1 reveals a novel two-step regulatory mechanism.Chromatin assembly factor I mutants defective for PCNA binding require Asf1/Hir proteins for silencing.Histone Chaperone Nap1 Is a Major Regulator of Histone H2A-H2B Dynamics at the Inducible GAL Locus.Functions of protosilencers in the formation and maintenance of heterochromatin in Saccharomyces cerevisiae.The promoter and transcribed regions of the Leishmania tarentolae spliced leader RNA gene array are devoid of nucleosomes.ORC, MCM, and histone hyperacetylation at the Kaposi's sarcoma-associated herpesvirus latent replication origin.In vivo interactions of the Acanthamoeba TBP gene promoter.

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