Characterization of human immunodeficiency virus type-1 from HIV-1 seropositive cases with undetectable viremia.

Chunfu Yang, Ming Li, Faye Cowart, Donna Rudolph, Bharat Parekh, J Steve McDougal, Renu B Lal
Author Information
  1. Chunfu Yang: National Center for HIV, STD and TB Prevention, Centers for Disease Control and Prevention, Mail Stop D-12, 1600 Clifton Road, Atlanta, GA 30333, USA. cyang1@cdc.gov

Abstract

BACKGROUND: Human immunodeficiency virus type 1 (HIV-1) viral load has become a standard of care among HIV-1-infected patients; however, a small number of patients have undetectable viral load even though they have never been treated.
METHODS: By using RT-PCR and DNA-PCR, and followed by sequencing and phylogenetic analyses, a detailed molecular characterization was carried out from five HIV-1-seropositive patients who had undetectable viral load by commercially available ultrasensitive viral load assays.
RESULTS: Of the four patients whose plasmas were available, viral RNAs were detected in three of them by using an in-house RT-PCR in at least one of the three regions (integrase, protease or envgp41). The fourth patient had positive RT-PCR signals in these regions only when RNA isolated from the supernatant of cocultivated patient PBLs with PHA-stimulated HIV-1 negative donor PBLs was used. Further analysis of DNA extracted from the PBMCs revealed that four of the five patients had detectable proviral sequences in at least two of the three regions. The fifth patient had only positive PCR results in all three regions when DNA isolated from PHA-stimulated patient's PBLs was used. Phylogenetic analysis of protease and envgp41 regions revealed that three patients were infected with subtype B viruses while the remaining two patients were infected with subtype C and CRF02_AG viruses. These subtypes coincided with geographic origin and known molecular epidemiology of HIV-1 infection.
CONCLUSION: These data provide evidence that both subtype B and non-B HIV-1 infection can result in undetectable viral load in HIV-1-infected patients and that efforts should continue to further characterize these viruses.

MeSH Term

Adult
Aged
DNA, Viral
Female
HIV Antibodies
HIV Infections
HIV Seropositivity
HIV-1
Humans
Male
Middle Aged
Phylogeny
RNA, Viral
Sequence Analysis, DNA
Viral Load
Viremia

Chemicals

DNA, Viral
HIV Antibodies
RNA, Viral

Word Cloud

Created with Highcharts 10.0.0patientsviralHIV-1loadthreeregionsundetectableRT-PCRpatientPBLssubtypevirusesimmunodeficiencyvirusHIV-1-infectedusingmolecularfiveavailablefourleastproteaseenvgp41positiveisolatedPHA-stimulatedusedanalysisDNArevealedtwoinfectedBinfectionBACKGROUND:Humantype1becomestandardcareamonghoweversmallnumbereventhoughnevertreatedMETHODS:DNA-PCRfollowedsequencingphylogeneticanalysesdetailedcharacterizationcarriedHIV-1-seropositivecommerciallyultrasensitiveassaysRESULTS:whoseplasmasRNAsdetectedin-houseoneintegrasefourthsignalsRNAsupernatantcocultivatednegativedonorextractedPBMCsdetectableproviralsequencesfifthPCRresultspatient'sPhylogeneticremainingCCRF02_AGsubtypescoincidedgeographicoriginknownepidemiologyCONCLUSION:dataprovideevidencenon-BcanresulteffortscontinuecharacterizeCharacterizationhumantype-1seropositivecasesviremia

Similar Articles

Cited By