Species concepts and biodiversity in Trichoderma and Hypocrea: from aggregate species to species clusters?

Irina Druzhinina, Christian P Kubicek
Author Information
  1. Irina Druzhinina: Institute of Chemical Engineering, Research Area Gene Technology and Applied Biochemistry, Getreidemarkt 9/E1665, A-1060 Vienna, Austria.

Abstract

Trichoderma/Hypocrea is a genus of soil-borne or wood-decaying fungi containing members important to mankind as producers of industrial enzymes and biocontrol agents against plant pathogens, but also as opportunistic pathogens of immunocompromised humans. Species identification, while essential in view of the controversial properties of taxa of this genus, has been problematic by traditional methods. Here we will present a critical survey of the various identification methods in use. In addition, we will present an update on the taxonomy and phylogeny of the 88 taxa (which occur as 14 holomorphs, 49 teleomorphs and 25 anamorphs in nature) of Trichoderma/Hypocrea that have been confirmed by a combination of morphological, physiological and genetic approaches.

References

  1. Curr Genet. 1992 Sep;22(3):213-20 [PMID: 1525873]
  2. Fungal Genet Biol. 2003 Apr;38(3):310-9 [PMID: 12684020]
  3. Nature. 2001 Jun 21;411(6840):937-40 [PMID: 11418855]
  4. Trends Ecol Evol. 2001 Jan 1;16(1):30-37 [PMID: 11146142]
  5. Acta Microbiol Immunol Hung. 2003;50(2-3):105-17 [PMID: 12894482]
  6. Microbiol Res. 2003;158(2):125-33 [PMID: 12906385]
  7. Fungal Genet Biol. 2000 Oct;31(1):21-32 [PMID: 11118132]
  8. Annu Rev Phytopathol. 1999;37:197-246 [PMID: 11701822]
  9. Mycologia. 2003 Nov-Dec;95(6):1100-40 [PMID: 21149016]
  10. J Mol Evol. 1996 Sep;43(3):304-11 [PMID: 8703097]
  11. Appl Environ Microbiol. 2000 May;66(5):1890-8 [PMID: 10788356]
  12. Proc Natl Acad Sci U S A. 1996 Jul 23;93(15):7755-60 [PMID: 8755548]
  13. Appl Environ Microbiol. 1999 Jun;65(6):2418-28 [PMID: 10347022]
  14. Mycologia. 2004 Sep-Oct;96(5):1059-73 [PMID: 21148926]
  15. Mycol Res. 2004 Aug;108(Pt 8):897-906 [PMID: 15449594]
  16. Fungal Genet Biol. 1998 Aug;24(3):298-309 [PMID: 9756711]
  17. Mol Phylogenet Evol. 2003 May;27(2):302-13 [PMID: 12695093]
  18. Mycologia. 2003 Jan-Feb;95(1):27-40 [PMID: 21156586]
  19. FEMS Microbiol Lett. 2001 Sep 25;203(2):249-55 [PMID: 11583856]
  20. Genetics. 1997 Mar;145(3):821-32 [PMID: 9055091]
  21. Bioinformatics. 2001 Aug;17(8):754-5 [PMID: 11524383]
  22. Mycologia. 2002 Jan-Feb;94(1):146-70 [PMID: 21156486]
  23. Mycologia. 2004 Mar-Apr;96(2):310-42 [PMID: 21148857]

MeSH Term

Chromosome Mapping
Conserved Sequence
Evolution, Molecular
Genome, Fungal
Hypocrea
Phylogeny
Sequence Analysis, DNA
Sequence Homology, Nucleic Acid
Species Specificity
Trichoderma

Word Cloud

Created with Highcharts 10.0.0Trichoderma/HypocreagenuspathogensSpeciesidentificationtaxamethodswillpresentspeciessoil-bornewood-decayingfungicontainingmembersimportantmankindproducersindustrialenzymesbiocontrolagentsplantalsoopportunisticimmunocompromisedhumansessentialviewcontroversialpropertiesproblematictraditionalcriticalsurveyvarioususeadditionupdatetaxonomyphylogeny88occur14holomorphs49teleomorphs25anamorphsnatureconfirmedcombinationmorphologicalphysiologicalgeneticapproachesconceptsbiodiversityTrichodermaHypocrea:aggregateclusters?

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