Cannabinoid CB2/CB1 selectivity. Receptor modeling and automated docking analysis.

Tiziano Tuccinardi, Pier Luigi Ferrarini, Clementina Manera, Gabriella Ortore, Giuseppe Saccomanni, Adriano Martinelli
Author Information
  1. Tiziano Tuccinardi: Dipartimento di Scienze Farmaceutiche, Università di Pisa, via Bonanno 6, 56126 Pisa, Italy.

Abstract

Three-dimensional models of the CB1 and CB2 cannabinoid receptors were constructed by means of a molecular modeling procedure, using the X-ray structure of bovine rhodopsin as the initial template, and taking into account the available site-directed mutagenesis data. The cannabinoid system was studied by means of docking techniques. An analysis of the interaction of WIN55212-2 with both receptors showed that CB2/CB1 selectivity is mainly determined by the interaction in the CB2 with the nonconserved residues S3.31 and F5.46, whose importance was suggested by site-directed mutagenesis data. We also carried out an automated docking of several ligands into the CB2 model, using the AUTODOCK 3.0 program; the good correlation obtained between the estimated free energy binding and the experimental binding data confirmed our binding hypothesis and the reliability of the model.

MeSH Term

Amino Acid Sequence
Animals
Arachidonic Acids
Benzoxazines
Cattle
Endocannabinoids
Indoles
Ligands
Models, Molecular
Molecular Sequence Data
Morpholines
Naphthalenes
Naphthyridines
Polyunsaturated Alkamides
Protein Conformation
Receptor, Cannabinoid, CB1
Receptor, Cannabinoid, CB2
Rhodopsin
Structure-Activity Relationship
Thermodynamics

Chemicals

Arachidonic Acids
Benzoxazines
Endocannabinoids
Indoles
Ligands
Morpholines
Naphthalenes
Naphthyridines
Polyunsaturated Alkamides
Receptor, Cannabinoid, CB1
Receptor, Cannabinoid, CB2
(3R)-((2,3-dihydro-5-methyl-3-((4-morpholinyl)methyl)pyrrolo-(1,2,3-de)-1,4-benzoxazin-6-yl)(1-naphthalenyl))methanone
Rhodopsin
anandamide

Word Cloud

Created with Highcharts 10.0.0CB2datadockingbindingcannabinoidreceptorsmeansmodelingusingsite-directedmutagenesisanalysisinteractionCB2/CB1selectivityautomatedmodelThree-dimensionalmodelsCB1constructedmolecularprocedureX-raystructurebovinerhodopsininitialtemplatetakingaccountavailablesystemstudiedtechniquesWIN55212-2showedmainlydeterminednonconservedresiduesS331F546whoseimportancesuggestedalsocarriedseveralligandsAUTODOCK30programgoodcorrelationobtainedestimatedfreeenergyexperimentalconfirmedhypothesisreliabilityCannabinoidReceptor

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