Molecular characterization of hsp20, encoding a small heat shock protein of bifidobacterium breve UCC2003.

Marco Ventura, Carlos Canchaya, Ziding Zhang, Gerald F Fitzgerald, Douwe van Sinderen
Author Information
  1. Marco Ventura: Department of Genetics, Anthropology and Evolution, University of Parma, Parma, Italy.

Abstract

Small heat shock proteins (sHSPs) are members of a diverse family of stress proteins that are important in cells to protect proteins under stressful conditions. Genome analysis of Bifidobacterium breve UCC2003 revealed a single sHSP-encoding gene, which was classified as a hsp20 gene by comparative analyses. Genomic surveillance of available genome sequences indicated that hsp20 homologs are not widely distributed in bacteria. In members of the genus Bifidobacterium, this gene appears to be present in only 7 of the 30 currently described species. Moreover, phylogenetic analysis using all available bacterial and eukaryotic sHSP sequences revealed a close relationship between bifidobacterial HSP20 and the class B sHSPs found in members of the division Firmicutes. The results of this comparative analysis and variation in codon usage content suggest that hsp20 was acquired by certain bifidobacteria through horizontal gene transfer. Analysis by slot blot, Northern blot, and primer extension experiments showed that transcription of hsp20 is strongly induced in response to severe heat shock regimens and by osmotic shock.

Associated Data

GENBANK | EF071947

References

  1. J Biol Chem. 2000 Jan 14;275(2):1035-42 [PMID: 10625643]
  2. FEMS Microbiol Rev. 2006 Sep;30(5):734-59 [PMID: 16911042]
  3. Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3538-43 [PMID: 10716740]
  4. Curr Opin Struct Biol. 2000 Apr;10(2):251-8 [PMID: 10753820]
  5. Nat Struct Biol. 2001 Dec;8(12):1025-30 [PMID: 11702068]
  6. Microbiol Mol Biol Rev. 2002 Mar;66(1):64-93; table of contents [PMID: 11875128]
  7. Science. 2002 Mar 8;295(5561):1852-8 [PMID: 11884745]
  8. Virology. 2002 Apr 25;296(1):62-76 [PMID: 12036318]
  9. Antonie Van Leeuwenhoek. 2002 Aug;82(1-4):279-89 [PMID: 12369194]
  10. Proc Natl Acad Sci U S A. 2002 Oct 29;99(22):14422-7 [PMID: 12381787]
  11. Nucleic Acids Res. 2003 Jul 1;31(13):3381-5 [PMID: 12824332]
  12. Appl Environ Microbiol. 2003 Nov;69(11):6908-22 [PMID: 14602655]
  13. Appl Environ Microbiol. 2004 Oct;70(10):6197-209 [PMID: 15466567]
  14. Nucleic Acids Res. 1981 Jan 10;9(1):r43-74 [PMID: 7208352]
  15. J Bacteriol. 1993 Jun;175(11):3394-400 [PMID: 8501044]
  16. J Bacteriol. 1995 Jun;177(11):2998-3003 [PMID: 7768794]
  17. EMBO J. 1997 Jan 15;16(2):221-9 [PMID: 9029143]
  18. EMBO J. 1997 Feb 3;16(3):659-71 [PMID: 9034347]
  19. Cell. 1998 Feb 6;92(3):351-66 [PMID: 9476895]
  20. J Mol Biol. 1998 Mar 20;277(1):27-35 [PMID: 9514758]
  21. Trends Biochem Sci. 1998 Feb;23(2):68-73 [PMID: 9538692]
  22. Int J Biol Macromol. 1998 May-Jun;22(3-4):151-62 [PMID: 9650070]
  23. J Biol Chem. 1999 Oct 15;274(42):30190-5 [PMID: 10514509]
  24. Antonie Van Leeuwenhoek. 2004 Oct;86(3):205-23 [PMID: 15539925]
  25. Appl Environ Microbiol. 2005 Jan;71(1):487-500 [PMID: 15640225]
  26. Mol Microbiol. 2005 Mar;55(5):1579-90 [PMID: 15720562]
  27. Microbiology. 2005 Sep;151(Pt 9):2861-72 [PMID: 16151199]
  28. J Biol Chem. 2005 Sep 30;280(39):33419-25 [PMID: 16046399]
  29. Appl Environ Microbiol. 2005 Oct;71(10):6282-91 [PMID: 16204550]
  30. FEBS J. 2005 Oct;272(20):5129-48 [PMID: 16218947]
  31. J Bacteriol. 2005 Dec;187(24):8411-26 [PMID: 16321946]
  32. Appl Environ Microbiol. 2005 Dec;71(12):8998-9007 [PMID: 16332909]
  33. J Mol Evol. 2006 Mar;62(3):257-66 [PMID: 16474980]
  34. Protein Sci. 2000 Feb;9(2):232-41 [PMID: 10716175]

MeSH Term

Amino Acid Sequence
Bacterial Proteins
Bifidobacterium
DNA, Bacterial
Genome, Bacterial
HSP20 Heat-Shock Proteins
Molecular Sequence Data
Phylogeny
Sequence Alignment
Sequence Analysis, DNA
Sequence Homology, Amino Acid

Chemicals

Bacterial Proteins
DNA, Bacterial
HSP20 Heat-Shock Proteins

Word Cloud

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