NMR structure of the cathelicidin-derived human antimicrobial peptide LL-37 in dodecylphosphocholine micelles.

Fernando Porcelli, Raffaello Verardi, Lei Shi, Katherine A Henzler-Wildman, Ayyalusamy Ramamoorthy, Gianluigi Veglia
Author Information
  1. Fernando Porcelli: Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, Minnesota 55455, USA.

Abstract

LL-37 is the only cathelicidin-derived polypeptide found in humans. Its eclectic function makes this peptide one of the most intriguing chemical defense agents, with crucial roles in moderating inflammation, promoting wound healing, and boosting the human immune system. LL-37 kills both prokaryotic and eukaryotic cells through physical interaction with cell membranes. In order to study its active conformation in membranes, we have reconstituted LL-37 into dodecylphosphocholine (DPC) micelles and determined its three-dimensional structure. We found that, under our experimental conditions, this peptide adopts a helix-break-helix conformation. Both the N- and C-termini are unstructured and solvent exposed. The N-terminal helical domain is more dynamic, while the C-terminal helix is more solvent protected and structured (high density of NOEs, slow H/D exchange). When it interacts with DPC, LL-37 is adsorbed on the surface of the micelle with the hydrophilic face exposed to the water phase and the hydrophobic face buried in the micelle hydrocarbon region. The break between the helices is positioned at K12 and is probably stabilized by a hydrophobic cluster formed by I13, F17, and I20 in addition to a salt bridge between K12 and E16. These results support the proposed nonpore carpet-like mechanism of action, in agreement with the solid-state NMR studies, and pave the way for understanding the function of the mature LL-37 at the atomic level.

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Grants

  1. R01 AI054515/NIAID NIH HHS
  2. HL0800081/NHLBI NIH HHS
  3. R01 GM064742-07/NIGMS NIH HHS
  4. GM64742/NIGMS NIH HHS
  5. R01 GM064742/NIGMS NIH HHS
  6. K02 HL080081-03/NHLBI NIH HHS
  7. R01 GM072701/NIGMS NIH HHS
  8. K02 HL080081/NHLBI NIH HHS
  9. AI054515/NIAID NIH HHS
  10. R01 GM072701-02/NIGMS NIH HHS

MeSH Term

Amino Acid Sequence
Antimicrobial Cationic Peptides
Humans
Micelles
Models, Molecular
Molecular Sequence Data
Nuclear Magnetic Resonance, Biomolecular
Phosphorylcholine
Protein Structure, Tertiary
Cathelicidins

Chemicals

Antimicrobial Cationic Peptides
Micelles
Phosphorylcholine
dodecylphosphocholine
Cathelicidins

Word Cloud

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