First detection, isolation and molecular characterization of infectious salmon anaemia virus associated with clinical disease in farmed Atlantic salmon (Salmo salar) in Chile.

Marcos G Godoy, Alejandra Aedo, Molly J T Kibenge, David B Groman, Carmencita V Yason, Horts Grothusen, Angelica Lisperguer, Marlene Calbucura, Fernando Avendaño, Marcelo Imilán, Miguel Jarpa, Frederick S B Kibenge
Author Information
  1. Marcos G Godoy: Biovac SA, Puerto Montt, Chile. mgodoy@biovac.cl

Abstract

BACKGROUND: Infectious salmon anaemia (ISA) is a viral disease of marine-farmed Atlantic salmon (Salmo salar) caused by ISA virus (ISAV), which belongs to the genus Isavirus, family Orthomyxoviridae. The virus is considered to be carried by marine wild fish and for over 25 years has caused major disease outbreaks in marine-farmed Atlantic salmon in the Northern hemisphere. In the Southern hemisphere, ISAV was first detected in Chile in 1999 in marine-farmed Coho salmon (Oncorhynchus kisutch). In contrast to the classical presentation of ISA in Atlantic salmon, the presence of ISAV in Chile until now has only been associated with a clinical condition called Icterus Syndrome in Coho salmon and virus isolation has not always been possible. During the winter of 2007, unexplained mortalities were registered in market-size Atlantic salmon in a grow-out site located in Chiloé in Region X of Chile. We report here the diagnostic findings of the first significant clinical outbreak of ISA in marine-farmed Atlantic salmon in Chile and the first characterization of the ISAV isolated from the affected fish.
RESULTS: In mid-June 2007, an Atlantic salmon marine farm site located in central Chiloé Island in Region X of Chile registered a sudden increase in mortality following recovery from an outbreak of Pisciricketsiosis, which rose to a cumulative mortality of 13.6% by harvest time. Based on the clinical signs and lesions in the affected fish, and laboratory tests performed on the fish tissues, a confirmatory diagnosis of ISA was made; the first time ISA in its classical presentation and for the first time affecting farmed Atlantic salmon in Chile. Rapid sequencing of the virus-specific RT-PCR products amplified from the fish tissues identified the virus to belong to the European genotype (Genotype I) of the highly polymorphic region (HPR) group HPR 7b, but with an 11-amino acid insert in the fusion glycoprotein, and ability to cause cytopathic effects (CPE) in CHSE-214 cell line, characteristics which make it distinct from common European Genotype ISAV isolates from Europe and North America.
CONCLUSION: In conclusion, the present work constitutes the first report of a case of ISA in farmed Atlantic salmon in Chile. The clinical signs and lesions are consistent with the classical descriptions of the disease in marine-farmed Atlantic salmon in the Northern hemisphere. The outbreak was caused by ISAV of European genotype (or Genotype I) of HPR 7b but distinct from common European Genotype ISAV isolates.

Associated Data

GENBANK | AM941715; EU130923; EU486160; EU486161

References

  1. Dis Aquat Organ. 2001 May 4;45(1):19-24 [PMID: 11411640]
  2. Virology. 2002 Dec 20;304(2):379-91 [PMID: 12504577]
  3. J Fish Dis. 2006 Dec;29(12):709-15 [PMID: 17169103]
  4. Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444-8 [PMID: 3162770]
  5. Emerg Infect Dis. 2004 Apr;10(4):693-9 [PMID: 15200862]
  6. J Gen Virol. 2001 Dec;82(Pt 12):2869-2879 [PMID: 11714961]
  7. Dis Aquat Organ. 1999 Jan 29;35(2):131-7 [PMID: 10092976]
  8. J Gen Virol. 2007 Nov;88(Pt 11):3100-3111 [PMID: 17947536]
  9. Virol J. 2007 Mar 29;4:34 [PMID: 17394643]
  10. Dis Aquat Organ. 2003 Aug 15;56(1):11-24 [PMID: 14524497]
  11. Emerg Infect Dis. 2004 Dec;10(12):2192-5 [PMID: 15663859]
  12. Dis Aquat Organ. 2000 Feb 24;40(1):9-18 [PMID: 10785858]
  13. Nature. 1989 Jul 13;340(6229):156-7 [PMID: 2544809]
  14. J Mol Biol. 1990 Oct 5;215(3):403-10 [PMID: 2231712]
  15. Dis Aquat Organ. 2002 Nov 7;52(1):11-20 [PMID: 12517001]
  16. J Virol. 1999 Mar;73(3):2136-42 [PMID: 9971796]
  17. Dis Aquat Organ. 2001 May 4;45(1):9-18 [PMID: 11411649]
  18. J Virol. 2004 Mar;78(6):3063-71 [PMID: 14990725]
  19. J Gen Virol. 2002 Feb;83(Pt 2):421-428 [PMID: 11807235]
  20. J Virol. 2005 Oct;79(19):12544-53 [PMID: 16160182]
  21. J Virol. 2004 Mar;78(6):3055-62 [PMID: 14990724]
  22. Biotechniques. 1991 Jul;11(1):65-7 [PMID: 1954021]
  23. Virology. 2008 Sep 15;379(1):55-63 [PMID: 18632128]
  24. J Gen Virol. 2000 Jan;81(Pt 1):143-50 [PMID: 10640552]
  25. Res Vet Sci. 1991 Sep;51(2):215-22 [PMID: 1788486]
  26. Dis Aquat Organ. 2007 Oct 31;78(1):1-12 [PMID: 18159667]
  27. J Gen Virol. 2006 Jul;87(Pt 7):2031-2040 [PMID: 16760406]
  28. Dis Aquat Organ. 2005 Aug 9;66(1):71-9 [PMID: 16175969]
  29. Virology. 1994 Oct;204(1):462-5 [PMID: 8091680]
  30. Virology. 2008 May 10;374(2):515-27 [PMID: 18280528]

MeSH Term

Amino Acid Sequence
Animals
Antibodies, Viral
Antigens, Viral
Chile
Fish Diseases
Fisheries
Isavirus
Molecular Sequence Data
Orthomyxoviridae Infections
Polymorphism, Genetic
Reverse Transcriptase Polymerase Chain Reaction
Salmo salar
Sequence Alignment
Viral Fusion Proteins

Chemicals

Antibodies, Viral
Antigens, Viral
Viral Fusion Proteins

Word Cloud

Created with Highcharts 10.0.0salmonAtlanticChileISAISAVfirstmarine-farmedvirusfishclinicaldiseaseEuropeanGenotypecausedhemisphereclassicaloutbreaktimefarmedHPRanaemiaSalmosalarmarineNorthernCohopresentationassociatedisolation2007registeredsitelocatedChiloéRegionXreportcharacterizationaffectedmortalitysignslesionstissuesgenotype7bdistinctcommonisolatesBACKGROUND:InfectiousviralbelongsgenusIsavirusfamilyOrthomyxoviridaeconsideredcarriedwild25yearsmajoroutbreaksSoutherndetected1999OncorhynchuskisutchcontrastpresencenowconditioncalledIcterusSyndromealwayspossiblewinterunexplainedmortalitiesmarket-sizegrow-outdiagnosticfindingssignificantisolatedRESULTS:mid-JunefarmcentralIslandsuddenincreasefollowingrecoveryPisciricketsiosisrosecumulative136%harvestBasedlaboratorytestsperformedconfirmatorydiagnosismadeaffectingRapidsequencingvirus-specificRT-PCRproductsamplifiedidentifiedbelonghighlypolymorphicregiongroup11-aminoacidinsertfusionglycoproteinabilitycausecytopathiceffectsCPECHSE-214celllinecharacteristicsmakeEuropeNorthAmericaCONCLUSION:conclusionpresentworkconstitutescaseconsistentdescriptionsFirstdetectionmolecularinfectious

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