Bayesian analysis of fMRI data with ICA based spatial prior.

Deepti R Bathula, Hemant D Tagare, Lawrence H Staib, Xenophon Papademetris, Robert T Schultz, James S Duncan
Author Information
  1. Deepti R Bathula: Department of Biomedical Engineering, Yale University, P.O. Box 208042, New Haven, CT 06520, USA. deepti.bathula@yale.edu

Abstract

Spatial modeling is essential for fMRI analysis due to relatively high noise in the data. Earlier approaches have been primarily concerned with the spatial coherence of the BOLD response in local neighborhoods. In addition to a smoothness constraint, we propose to incorporate prior knowledge of brain activation patterns learned from training samples. This spatially informed prior can significantly enhance the estimation process by inducing sensitivity to task related regions of the brain. As fMRI data exhibits intersubject variability in functional anatomy, we design the prior using Independent Component Analysis (ICA). Due to the non-Gaussian assumption, ICA does not regress to the mean activation pattern and thus avoids suppressing intersubject differences. Results from a real fMRI experiment indicate that our approach provides statistically significant improvement in estimating activation compared to the standard general linear model (GLM) based methods.

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Grants

  1. R01 NS035193/NINDS NIH HHS
  2. R01 NS035193-12/NINDS NIH HHS

MeSH Term

Algorithms
Bayes Theorem
Brain
Brain Mapping
Data Interpretation, Statistical
Evoked Potentials
Humans
Image Enhancement
Image Interpretation, Computer-Assisted
Magnetic Resonance Imaging
Principal Component Analysis
Reproducibility of Results
Sensitivity and Specificity

Word Cloud

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