Gene profiling of patients with chronic fatigue syndrome/myalgic encephalomyelitis.

Jonathan R Kerr
Author Information
  1. Jonathan R Kerr: St. George's University of London, Cranmer Terrace, London SW17 0RE, United Kingdom. jkerr@sgul.ac.uk

Abstract

Chronic fatigue syndrome/myalgic encephalomyelitis (CFS/ME) is a multisystem disease, the pathogenesis of which remains undetermined. Following two microarray studies, we reported the differential expression of 88 human genes in patients with CFS; 85 of these genes were upregulated and 3 were downregulated. The top functional categories of these 88 genes were hematologic disease and function, immunologic disease and function, cancer, cell death, immune response, and infection. Clustering of quantitative polymerase chain reaction data from CFS/ME patients revealed seven subtypes with distinct differences in Short Form (SF)-36 scores, clinical phenotypes, and severity. Gene signatures in each subtype implicate five human genes as possible targets for specific therapy. Development of a diagnostic test for subtype status is now a priority. The possibility that these subtypes represent individual host responses to particular microbial infections is being investigated and may provide another route to specific therapies for CFS patients.

References

  1. Annu Rev Med. 1998;49:1-13 [PMID: 9509246]
  2. J Clin Pathol. 2007 Feb;60(2):113-6 [PMID: 16935968]
  3. Pharmacogenomics. 2006 Apr;7(3):429-40 [PMID: 16610953]
  4. J Intern Med. 2005 Oct;258(4):388-90 [PMID: 16164580]
  5. In Vivo. 2007 Sep-Oct;21(5):707-13 [PMID: 18019402]
  6. Ann Intern Med. 1994 Dec 15;121(12):953-9 [PMID: 7978722]
  7. J Clin Virol. 2006 Dec;37 Suppl 1:S33-8 [PMID: 17276366]
  8. J Rheumatol. 2002 Mar;29(3):595-602 [PMID: 11911112]
  9. Intern Med. 2004 Jan;43(1):49-54 [PMID: 14964579]
  10. J Clin Pathol. 2005 Aug;58(8):826-32 [PMID: 16049284]
  11. J Clin Pathol. 2007 Feb;60(2):195-8 [PMID: 16731592]
  12. Pharmacogenomics. 2006 Apr;7(3):407-19 [PMID: 16610951]
  13. Dis Markers. 2002;18(4):193-9 [PMID: 12590173]
  14. Pharmacogenomics. 2006 Apr;7(3):375-86 [PMID: 16610948]
  15. J Clin Virol. 2006 Nov;37(3):139-50 [PMID: 16978917]
  16. Neuropsychol Rev. 2005 Mar;15(1):29-58 [PMID: 15929497]
  17. J Transl Med. 2003 Dec 1;1(1):10 [PMID: 14641939]
  18. Neuroimmunomodulation. 2004;11(2):65-74 [PMID: 14758052]
  19. Lancet. 2001 Dec 8;358(9297):1946-54 [PMID: 11747919]
  20. J Clin Pathol. 2008 Jun;61(6):730-9 [PMID: 18057078]
  21. J Infect Dis. 2008 Apr 15;197(8):1171-84 [PMID: 18462164]
  22. BMC Physiol. 2005 Mar 24;5(1):5 [PMID: 15790422]
  23. QJM. 1998 Feb;91(2):105-23 [PMID: 9578893]
  24. Pharmacogenomics. 2006 Apr;7(3):441-54 [PMID: 16610954]
  25. Clin Infect Dis. 1999 Aug;29(2):452-3 [PMID: 10476765]
  26. Pharmacogenomics. 2006 Apr;7(3):395-405 [PMID: 16610950]
  27. Intervirology. 1995;38(5):269-73 [PMID: 8724857]
  28. J Clin Pathol. 2005 Nov;58(11):1126-32 [PMID: 16254097]
  29. Clin Infect Dis. 2003 Mar 1;36(5):671-2; author reply 672-3 [PMID: 12594650]
  30. Nucleic Acids Res. 2003 Apr 1;31(7):1995-2005 [PMID: 12655017]
  31. Clin Infect Dis. 2003 May 1;36(9):e100-6 [PMID: 12715326]
  32. J Clin Pathol. 2008 Jan;61(1):43-8 [PMID: 17872383]
  33. Clin Exp Allergy. 2003 Oct;33(10):1450-6 [PMID: 14519154]
  34. Biol Psychol. 2006 Aug;73(2):124-31 [PMID: 16473456]

Grants

  1. /Wellcome Trust

MeSH Term

Fatigue Syndrome, Chronic
Female
Gene Expression Profiling
Gene Expression Regulation
Genetic Predisposition to Disease
Humans
Male
Oligonucleotide Array Sequence Analysis

Word Cloud

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