Biophysical characterization of the centromere-specific nucleosome from budding yeast.

Isabel J Kingston, Jasmine S Y Yung, Martin R Singleton
Author Information
  1. Isabel J Kingston: Macromolecular Structure and Function Laboratory, Cancer Research UK London Research Institute, 44 Lincoln's Inn Fields, London WC2A 3LY, United Kingdom.

Abstract

The centromeric DNA of all eukaryotes is assembled upon a specialized nucleosome containing a histone H3 variant known as CenH3. Despite the importance and conserved nature of this protein, the characteristics of the centromeric nucleosome are still poorly understood. In particular, the stoichiometry and DNA-binding properties of the CenH3 nucleosome have been the subject of some debate. We have characterized the budding yeast centromeric nucleosome by biochemical and biophysical methods and show that it forms a stable octamer containing two copies of the Cse4 protein and wraps DNA in a left-handed supercoil, similar to the canonical H3 nucleosome. The DNA-binding properties of the recombinant nucleosome are identical to those observed in vivo demonstrating that the octameric structure is physiologically relevant.

References

  1. Biophys J. 2000 Mar;78(3):1606-19 [PMID: 10692345]
  2. PLoS Biol. 2007 Aug;5(8):e218 [PMID: 17676993]
  3. EMBO J. 2001 Sep 17;20(18):5207-18 [PMID: 11566884]
  4. Nat Struct Mol Biol. 2009 Oct;16(10):1056-62 [PMID: 19734899]
  5. Methods Enzymol. 2004;375:23-44 [PMID: 14870657]
  6. Science. 2000 Jun 23;288(5474):2215-9 [PMID: 10864871]
  7. Mol Cell. 2007 Jan 26;25(2):309-22 [PMID: 17244537]
  8. Nat Rev Genet. 2008 Dec;9(12):923-37 [PMID: 19002142]
  9. Nature. 2010 Sep 16;467(7313):347-51 [PMID: 20739937]
  10. Proc Natl Acad Sci U S A. 2000 Jun 20;97(13):7266-71 [PMID: 10840064]
  11. Nature. 1997 Sep 18;389(6648):251-60 [PMID: 9305837]
  12. Cell. 1998 Sep 4;94(5):607-13 [PMID: 9741625]
  13. Nature. 2004 Jul 29;430(6999):578-82 [PMID: 15282608]
  14. Proc Natl Acad Sci U S A. 2000 Jan 18;97(2):716-21 [PMID: 10639145]
  15. Chromosoma. 1985;91(3-4):313-21 [PMID: 2579778]
  16. Cell. 2009 Dec 24;139(7):1216-7; author reply 1217-8 [PMID: 20064364]
  17. Mol Cell. 2009 Sep 24;35(6):794-805 [PMID: 19782029]
  18. Structure. 2008 Jun;16(6):837-41 [PMID: 18547516]
  19. Cell. 2009 Jul 10;138(1):104-13 [PMID: 19596238]
  20. Cell. 2007 Jun 15;129(6):1153-64 [PMID: 17574026]
  21. Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6172-7 [PMID: 16601098]
  22. Cell. 2009 Jul 10;138(1):22-4 [PMID: 19596232]
  23. J Cell Biol. 1991 Jan;112(2):191-201 [PMID: 1988457]

MeSH Term

Centromere
Chromosomal Proteins, Non-Histone
DNA-Binding Proteins
Histones
Mutant Proteins
Nucleosomes
Protein Multimerization
Saccharomycetales

Chemicals

Chromosomal Proteins, Non-Histone
DNA-Binding Proteins
Histones
Mutant Proteins
Nucleosomes

Word Cloud

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