Sequential mechanism of assembly of multidrug efflux pump AcrAB-TolC.

Elena B Tikhonova, Yoichi Yamada, Helen I Zgurskaya
Author Information
  1. Elena B Tikhonova: Department of Chemistry and Biochemistry, Stephenson Life Science Research Center, University of Oklahoma, Norman, OK 73019, USA.

Abstract

Multidrug efflux pumps adversely affect both the clinical effectiveness of existing antibiotics and the discovery process to find new ones. In this study, we reconstituted and characterized by surface plasmon resonance the assembly of AcrAB-TolC, the archetypal multidrug efflux pump from Escherichia coli. We report that the periplasmic AcrA and the outer membrane channel TolC assemble high-affinity complexes with AcrB transporter independently from each other. Antibiotic novobiocin and MC-207,110 inhibitor bind to the immobilized AcrB but do not affect interactions between components of the complex. In contrast, DARPin inhibits interactions between AcrA and AcrB. Mutational opening of TolC channel decreases stability of interactions and promotes disassembly of the complex. The conformation of the membrane proximal domain of AcrA is critical for the formation of AcrAB-TolC and could be targeted for the development of new inhibitors.

References

  1. Nature. 2000 Jun 22;405(6789):914-9 [PMID: 10879525]
  2. J Biol Chem. 2004 Jul 30;279(31):32116-24 [PMID: 15155734]
  3. Mol Cell. 2008 Apr 11;30(1):114-21 [PMID: 18406332]
  4. Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16416-21 [PMID: 19805313]
  5. J Bacteriol. 2004 Dec;186(24):8533-6 [PMID: 15576805]
  6. Biochim Biophys Acta. 2009 May;1794(5):782-93 [PMID: 19166984]
  7. Nat Med. 2004 Dec;10(12 Suppl):S122-9 [PMID: 15577930]
  8. Biochim Biophys Acta. 2009 May;1794(5):769-81 [PMID: 19026770]
  9. J Biol Chem. 2006 Nov 10;281(45):34208-17 [PMID: 16982609]
  10. Mol Microbiol. 2010 Mar;75(6):1468-83 [PMID: 20132445]
  11. Future Microbiol. 2009 Sep;4(7):919-32 [PMID: 19722844]
  12. Clin Microbiol Infect. 2004 Nov;10 Suppl 4:1-9 [PMID: 15522034]
  13. Biochim Biophys Acta. 2009 May;1794(5):817-25 [PMID: 19289182]
  14. Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7173-8 [PMID: 19342493]
  15. Nat Rev Microbiol. 2006 Aug;4(8):629-36 [PMID: 16845433]
  16. Annu Rev Biochem. 2004;73:467-89 [PMID: 15189150]
  17. Science. 2006 Sep 1;313(5791):1295-8 [PMID: 16946072]
  18. Clin Infect Dis. 2006 Mar 1;42(5):657-68 [PMID: 16447111]
  19. Nature. 2002 Oct 10;419(6907):587-93 [PMID: 12374972]
  20. Proc Natl Acad Sci U S A. 1999 Jun 22;96(13):7190-5 [PMID: 10377390]
  21. Biochim Biophys Acta. 2009 May;1794(5):794-807 [PMID: 19041958]
  22. Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):2112-7 [PMID: 21245342]
  23. Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11103-8 [PMID: 12163644]
  24. Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4612-7 [PMID: 17360572]
  25. Biochemistry. 2005 Aug 23;44(33):11115-21 [PMID: 16101295]
  26. J Biol Chem. 2003 Dec 12;278(50):50474-82 [PMID: 14523004]
  27. PLoS Biol. 2007 Jan;5(1):e7 [PMID: 17194213]
  28. Structure. 2006 Mar;14(3):577-87 [PMID: 16531241]
  29. J Mol Biol. 1999 Jan 8;285(1):409-20 [PMID: 9878415]
  30. FEBS Lett. 2004 Dec 3;578(1-2):5-9 [PMID: 15581607]
  31. Antimicrob Agents Chemother. 2001 Jan;45(1):105-16 [PMID: 11120952]
  32. Biochim Biophys Acta. 2007 Jun;1768(6):1567-73 [PMID: 17467658]
  33. Mol Microbiol. 2000 Jul;37(2):219-25 [PMID: 10931319]
  34. J Bacteriol. 2009 Jul;191(13):4365-71 [PMID: 19411330]
  35. Mol Microbiol. 2004 Jul;53(2):697-706 [PMID: 15228545]

Grants

  1. R01 AI052293/NIAID NIH HHS
  2. R01 AI052293-09/NIAID NIH HHS
  3. R56 AI052293/NIAID NIH HHS
  4. AI052293/NIAID NIH HHS

MeSH Term

Bacterial Outer Membrane Proteins
Escherichia coli
Escherichia coli Proteins
Immobilized Proteins
Lipid Metabolism
Lipoproteins
Membrane Transport Proteins
Models, Molecular
Multidrug Resistance-Associated Proteins
Mutation
Protein Binding
Protein Conformation
Surface Plasmon Resonance

Chemicals

AcrA protein, E coli
AcrB protein, E coli
Bacterial Outer Membrane Proteins
Escherichia coli Proteins
Immobilized Proteins
Lipoproteins
Membrane Transport Proteins
Multidrug Resistance-Associated Proteins
tolC protein, E coli

Word Cloud

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