Identification of Chinese plague foci from long-term epidemiological data.

Tamara Ben-Ari, Simon Neerinckx, Lydiane Agier, Bernard Cazelles, Lei Xu, Zhibin Zhang, Xiye Fang, Shuchun Wang, Qiyong Liu, Nils C Stenseth
Author Information
  1. Tamara Ben-Ari: Centre for Ecological and Evolutionary Synthesis, Department of Biology, University of Oslo, N-0316 Oslo, Norway.

Abstract

Carrying out statistical analysis over an extensive dataset of human plague reports in Chinese villages from 1772 to 1964, we identified plague endemic territories in China (i.e., plague foci). Analyses rely on (i) a clustering method that groups time series based on their time-frequency resemblances and (ii) an ecological niche model that helps identify plague suitable territories characterized by value ranges for a set of predefined environmental variables. Results from both statistical tools indicate the existence of two disconnected plague territories corresponding to Northern and Southern China. Altogether, at least four well defined independent foci are identified. Their contours compare favorably with field observations. Potential and limitations of inferring plague foci and dynamics using epidemiological data is discussed.

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MeSH Term

China
Cluster Analysis
Disease Reservoirs
Ecosystem
Epidemics
History, 18th Century
History, 19th Century
History, 20th Century
Humans
Plague
Wavelet Analysis
Yersinia pestis

Word Cloud

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