Influenza sentinel surveillance in Rwanda, 2008-2010.

Thierry Nyatanyi, Richard Nkunda, Joseph Rukelibuga, Rakhee Palekar, Marie Aimée Muhimpundu, Adeline Kabeja, Alice Kabanda, David Lowrance, Stefano Tempia, Jean Baptiste Koama, David McAlister, Odette Mukabayire, Justin Wane, Pratima Raghunathan, Mark Katz, Corine Karema
Author Information
  1. Thierry Nyatanyi: Rwanda Biomedical Center, Ministry of Health, Kigali, Rwanda.

Abstract

BACKGROUND: In 2008, Rwanda established an influenza sentinel surveillance (ISS) system to describe the epidemiology of influenza and monitor for the emergence of novel influenza A viruses. We report surveillance results from August 2008 to July 2010.
METHODS: We conducted ISS by monitoring patients with influenza-like illness (ILI) and severe acute respiratory infection (SARI) at 6 hospitals. For each case, demographic and clinical data, 1 nasopharyngeal specimen, and 1 oropharyngeal specimen were collected. Specimens were tested by real-time reverse-transcription polymerase chain reaction for influenza A and B viruses at the National Reference Laboratory in Rwanda.
RESULTS: A total of 1916 cases (945 ILI and 971 SARI) were identified. Of these, 29.2% (n = 276) of ILI and 10.4% (n = 101) of SARI cases tested positive for influenza. Of the total influenza-positive cases (n = 377), 71.8% (n = 271) were A(H1N1) pdm09, 5.6% (n = 21) influenza A(H1), 7.7% (n = 29) influenza A(H3), 1.6% (n = 6) influenza A (unsubtyped), and 13.3% (n = 50) influenza B. The percentage of positivity for influenza viruses was highest in October-November and February-March, during peaks in rainfall.
CONCLUSIONS: The implementation of ISS enabled characterization of the epidemiology and seasonality of influenza in Rwanda for the first time. Future efforts should determine the population-based influenza burden to inform interventions such as targeted vaccination.

Grants

  1. IP00158/NCIRD CDC HHS

MeSH Term

Adolescent
Adult
Aged
Aged, 80 and over
Child
Child, Preschool
Female
Humans
Infant
Influenza A virus
Influenza, Human
Male
Middle Aged
Nasopharynx
Oropharynx
Prevalence
Real-Time Polymerase Chain Reaction
Reverse Transcriptase Polymerase Chain Reaction
Rwanda
Sentinel Surveillance
Young Adult

Word Cloud

Created with Highcharts 10.0.0influenzan=RwandasurveillanceISSvirusesILISARI1cases2008sentinelepidemiology6specimentestedBtotal296%BACKGROUND:establishedsystemdescribemonitoremergencenovelreportresultsAugustJuly2010METHODS:conductedmonitoringpatientsinfluenza-likeillnesssevereacuterespiratoryinfectionhospitalscasedemographicclinicaldatanasopharyngealoropharyngealcollectedSpecimensreal-timereverse-transcriptionpolymerasechainreactionNationalReferenceLaboratoryRESULTS:1916945971identified2%276104%101positiveinfluenza-positive377718%271H1N1pdm09521H177%H3unsubtyped133%50percentagepositivityhighestOctober-NovemberFebruary-MarchpeaksrainfallCONCLUSIONS:implementationenabledcharacterizationseasonalityfirsttimeFutureeffortsdeterminepopulation-basedburdeninforminterventionstargetedvaccinationInfluenza2008-2010

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