Sample preparation for single cell transcriptomics: essential oil glands in Citrus fruit peel as an example.

Siau Sie Voo, Bernd Markus Lange
Author Information
  1. Siau Sie Voo: Institute of Biological Chemistry, M.J. Murdock Metabolomics Laboratory, Washington State University, Clark Hall, Room 341, Pullman, WA, 99164-6340, USA.

Abstract

Many plant natural products are synthesized in specialized cells and tissues. To learn more about metabolism in these cells, they have to be studied in isolation. Here, we describe a protocol for the isolation of epithelial cells that surround secretory cavities in Citrus fruit peel. Cells isolated using laser microdissection are suitable for RNA isolation and downstream transcriptome analyses.

MeSH Term

Analytic Sample Preparation Methods
Cell Separation
Citrus
Gene Expression Profiling
Oils, Volatile
Plant Epidermis
RNA, Plant
Single-Cell Analysis
Tissue Embedding
Tissue Fixation

Chemicals

Oils, Volatile
RNA, Plant

Word Cloud

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