Polyphasic taxonomy of the genus Talaromyces.

N Yilmaz, C M Visagie, J Houbraken, J C Frisvad, R A Samson
Author Information
  1. N Yilmaz: CBS-KNAW Fungal Biodiversity Centre, 3508 AD, Utrecht, The Netherlands ; Department of Biology, Utrecht University, Utrecht, The Netherlands.
  2. C M Visagie: CBS-KNAW Fungal Biodiversity Centre, 3508 AD, Utrecht, The Netherlands.
  3. J Houbraken: CBS-KNAW Fungal Biodiversity Centre, 3508 AD, Utrecht, The Netherlands.
  4. J C Frisvad: Center for Microbial Biotechnology, Department of Systems Biology, Building 221, Technical University of Denmark, DK-2800, Kgs. Lyngby, Denmark.
  5. R A Samson: CBS-KNAW Fungal Biodiversity Centre, 3508 AD, Utrecht, The Netherlands.

Abstract

The genus Talaromyces was described by Benjamin in 1955 as a sexual state of Penicillium that produces soft walled ascomata covered with interwoven hyphae. Phylogenetic information revealed that Penicillium subgenus Biverticillium and Talaromyces form a monophyletic clade distinct from the other Penicillium subgenera. Subsequently, in combination with the recent adoption of the one fungus one name concept, Penicillium subgenus Biverticillium was transferred to Talaromyces. At the time, the new combinations were made based only on phylogenetic information. As such, the aim of this study was to provide a monograph on Talaromyces applying a polyphasic species concept, including morphological, molecular and physiological characters. Based on an ITS, BenA and RPB2 multigene phylogeny, we propose a new sectional classification for the genus, placing the 88 accepted species into seven sections, named sections Bacillispori, Helici, Islandici, Purpurei, Subinflati, Talaromyces and Trachyspermi. We provide morphological descriptions for each of these species, as well as notes on their identification using morphology and DNA sequences. For molecular identification, BenA is proposed as a secondary molecular marker to the accepted ITS barcode for fungi.

Keywords

References

  1. Biochem J. 1954 Jun;57(2):212-22 [PMID: 13172171]
  2. Mycopathologia. 2010 Sep;170(3):203-8 [PMID: 20349275]
  3. J Nat Prod. 1999 Sep;62(9):1328-9 [PMID: 10514327]
  4. Mikrobiologiia. 2006 Nov-Dec;75(6):742-6 [PMID: 17205797]
  5. J Med Vet Mycol. 1995 Sep-Oct;33(5):327-38 [PMID: 8544086]
  6. J Nat Prod. 2011 Nov 28;74(11):2338-48 [PMID: 22026385]
  7. Antonie Van Leeuwenhoek. 1990 Apr;57(3):179-89 [PMID: 2181929]
  8. Stud Mycol. 2011 Nov 15;70(1):159-83 [PMID: 22308048]
  9. Mikrobiologiia. 2008 Jul-Aug;77(4):502-7 [PMID: 18825977]
  10. Adv Appl Microbiol. 2014;86:199-249 [PMID: 24377856]
  11. Appl Environ Microbiol. 1978 Mar;35(3):563-6 [PMID: 565188]
  12. Appl Environ Microbiol. 2014 Jun;80(11):3484-7 [PMID: 24682295]
  13. Shokuhin Eiseigaku Zasshi. 2005 Oct;46(5):205-12 [PMID: 16305175]
  14. J Environ Pathol Toxicol. 1978 Nov-Dec;2(2):313-24 [PMID: 368283]
  15. Lancet. 1994 Jul 9;344(8915):110-3 [PMID: 7912350]
  16. Med Mycol. 2006 Dec;44(8):749-53 [PMID: 17127632]
  17. J Antibiot (Tokyo). 2011 Dec;64(12):769-74 [PMID: 22008698]
  18. J Am Chem Soc. 1965 Aug 5;87:3484-9 [PMID: 14322541]
  19. J Antibiot (Tokyo). 1986 Dec;39(12):1685-96 [PMID: 3818442]
  20. J Antibiot (Tokyo). 1984 Jul;37(7):712-7 [PMID: 6547944]
  21. Antonie Van Leeuwenhoek. 2012 Feb;101(2):403-21 [PMID: 21965082]
  22. J Antibiot (Tokyo). 2010 Dec;63(12):703-8 [PMID: 20940725]
  23. Chem Pharm Bull (Tokyo). 1992 May;40(5):1116-9 [PMID: 1394627]
  24. Toxicol Sci. 2001 Jun;61(2):368-73 [PMID: 11353145]
  25. Fungal Genet Biol. 2010 Aug;47(8):693-706 [PMID: 20460164]
  26. Int J Med Microbiol. 2002 Oct;292(5-6):331-47 [PMID: 12452280]
  27. J Antibiot (Tokyo). 1984 Jul;37(7):723-7 [PMID: 6547946]
  28. J Antibiot (Tokyo). 2009 Aug;62(8):431-4 [PMID: 19629141]
  29. Biochem J. 1986 Feb 15;234(1):93-9 [PMID: 3707549]
  30. J Antibiot (Tokyo). 1992 Oct;45(10):1559-65 [PMID: 1473982]
  31. Changgeng Yi Xue Za Zhi. 1998 Jun;21(2):206-10 [PMID: 9729657]
  32. Planta Med. 2006 Aug;72(10):957-60 [PMID: 16902873]
  33. Biochem J. 1948;43(1):iii [PMID: 18889888]
  34. Biochem J. 1954 Jan;56(1):56-65 [PMID: 13126093]
  35. Yeast. 1996 Sep 30;12(12):1187-200 [PMID: 8905923]
  36. J Agric Food Chem. 1976 Sep-Oct;24(5):964-72 [PMID: 987085]
  37. Biochem J. 1934;28(3):828-36 [PMID: 16745471]
  38. J Biotechnol. 2013 Jan 10;163(1):38-44 [PMID: 23123260]
  39. J Antibiot (Tokyo). 1973 Sep;26(9):535-6 [PMID: 4799788]
  40. Biochem J. 1955 Aug;60(4):618-26 [PMID: 13249956]
  41. J Antibiot (Tokyo). 1998 Dec;51(12):1081-6 [PMID: 10048566]
  42. PLoS One. 2013 Dec 19;8(12):e84102 [PMID: 24367630]
  43. Folia Microbiol (Praha). 1988;33(3):238-40 [PMID: 3397011]
  44. J Antibiot (Tokyo). 1984 Jul;37(7):718-22 [PMID: 6547945]
  45. Appl Environ Microbiol. 1978 Jun;35(6):1074-8 [PMID: 677874]
  46. J Antibiot (Tokyo). 1995 May;48(5):357-62 [PMID: 7797435]
  47. Fungal Genet Biol. 2000 Oct;31(1):21-32 [PMID: 11118132]
  48. Appl Environ Microbiol. 1995 Mar;61(3):941-3 [PMID: 7793924]
  49. Anal Bioanal Chem. 2014 Mar;406(7):1933-43 [PMID: 24442010]
  50. Indian J Biochem Biophys. 2012 Jun;49(3):189-94 [PMID: 22803334]
  51. Vet Clin Pathol. 2011 Dec;40(4):553-557 [PMID: 22136479]
  52. FEMS Microbiol Lett. 2014 Feb;351(1):32-41 [PMID: 24313660]
  53. J Nat Prod. 2000 Jun;63(6):768-72 [PMID: 10869198]
  54. Biochem J. 1950 Jan;46(1):49-53 [PMID: 16748635]
  55. Bioinformatics. 2001 Aug;17(8):754-5 [PMID: 11524383]
  56. Clin Infect Dis. 2001 Feb 15;32(4):e78-80 [PMID: 11181140]
  57. Biochem J. 1949;44(2):227-33 [PMID: 16748503]
  58. Mycologia. 2009 Nov-Dec;101(6):888-95 [PMID: 19927755]
  59. Org Lett. 2008 Mar 6;10(5):845-8 [PMID: 18237180]
  60. J Antibiot (Tokyo). 2010 Jun;63(6):329-30 [PMID: 20431614]
  61. Rev Infect Dis. 1988 May-Jun;10(3):640-52 [PMID: 3293165]
  62. Mol Biol Evol. 2011 Oct;28(10):2731-9 [PMID: 21546353]
  63. Mycoses. 1998 May-Jun;41(5-6):183-9 [PMID: 9715630]
  64. Chem Pharm Bull (Tokyo). 1975 Feb;23(2):351-4 [PMID: 1157200]
  65. Stud Mycol. 2014 Jun;78:141-73 [PMID: 25492982]
  66. Appl Microbiol Biotechnol. 2014;98(14):6339-52 [PMID: 24664446]
  67. J Antibiot (Tokyo). 1986 Dec;39(12):1674-84 [PMID: 3818441]
  68. Appl Environ Microbiol. 1995 Apr;61(4):1323-30 [PMID: 7747954]
  69. Syst Biol. 2004 Feb;53(1):47-67 [PMID: 14965900]
  70. J Chromatogr. 1987 Aug 28;404(1):195-214 [PMID: 3680432]
  71. Biosystems. 2007 Mar;88(1-2):113-26 [PMID: 16860929]
  72. Biosci Biotechnol Biochem. 2000 Jun;64(6):1317-9 [PMID: 10923813]
  73. Persoonia. 2012 Dec;29:39-54 [PMID: 23606764]
  74. Org Lett. 2010 Apr 2;12(7):1572-5 [PMID: 20222683]
  75. J Antibiot (Tokyo). 1999 Mar;52(3):224-30 [PMID: 10348036]
  76. Chem Pharm Bull (Tokyo). 1965 Oct;13(10):1240-6 [PMID: 5864706]
  77. Mycoses. 2001 Dec;44(11-12):502-4 [PMID: 11820265]
  78. Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6241-6 [PMID: 22454494]
  79. Tetrahedron Lett. 1965 May;(18):1287-8 [PMID: 5844744]
  80. FEBS Lett. 2006 Jun 12;580(14):3409-16 [PMID: 16714021]
  81. Nat Prod Lett. 2002 Jun;16(3):207-11 [PMID: 12049222]
  82. J Antibiot (Tokyo). 2009 Aug;62(8):435-7 [PMID: 19609292]
  83. J Antibiot (Tokyo). 2011 Jul;64(7):503-8 [PMID: 21610716]
  84. J Nat Prod. 2007 Jul;70(7):1200-2 [PMID: 17536857]
  85. Plant Dis. 2010 Jun;94(6):666-675 [PMID: 30754306]
  86. J Antibiot (Tokyo). 2012 Aug;65(8):419-25 [PMID: 22643231]
  87. Med J Malaysia. 1999 Jun;54(2):264-6 [PMID: 10972040]
  88. Stud Mycol. 2014 Jun;78:63-139 [PMID: 25492981]
  89. Stud Mycol. 2011 Nov 15;70(1):1-51 [PMID: 22308045]
  90. PLoS One. 2013 Oct 30;8(10):e78084 [PMID: 24205102]
  91. Chem Pharm Bull (Tokyo). 2010 Jun;58(6):829-32 [PMID: 20522994]
  92. Jpn J Exp Med. 1961 Feb;31:19-46 [PMID: 13779241]
  93. Prikl Biokhim Mikrobiol. 2004 Jan-Feb;40(1):32-6 [PMID: 15029694]
  94. J Paediatr Child Health. 1997 Jun;33(3):267-71 [PMID: 9259309]
  95. J Antibiot (Tokyo). 1992 Jul;45(7):1047-54 [PMID: 1387635]
  96. Toxicol Lett. 1984 Feb;20(2):155-60 [PMID: 6320499]
  97. J Agric Food Chem. 2007 Aug 22;55(17):6977-83 [PMID: 17628075]
  98. Appl Environ Microbiol. 2005 Jul;71(7):3959-65 [PMID: 16000810]
  99. J Toxicol Sci. 1980 Nov;5(4):295-302 [PMID: 7218376]
  100. J Antibiot (Tokyo). 1993 Jul;46(7):1101-8 [PMID: 8360106]
  101. Food Cosmet Toxicol. 1972 Apr;10(2):193-207 [PMID: 4342127]
  102. PLoS Pathog. 2012;8(10):e1002851 [PMID: 23055919]
  103. Appl Microbiol. 1969 Sep;18(3):406-9 [PMID: 5373676]
  104. Chem Pharm Bull (Tokyo). 1986 Apr;34(4):1497-500 [PMID: 3719858]
  105. Microb Cell Fact. 2009 Apr 27;8:24 [PMID: 19397825]
  106. Mol Biol Evol. 1999 Dec;16(12):1799-808 [PMID: 10605121]
  107. Persoonia. 2012 Jun;28:14-24 [PMID: 23105150]
  108. J Antibiot (Tokyo). 1979 Jun;32(6):667-9 [PMID: 468742]
  109. Folia Microbiol (Praha). 1978;23(1):64-7 [PMID: 564320]
  110. J Antibiot (Tokyo). 1992 Oct;45(10):1566-72 [PMID: 1473983]
  111. Am J Vet Res. 1957 Oct;18(69):817-24 [PMID: 13470239]
  112. Biotechnol Bioeng. 1983 Jul;25(7):1863-71 [PMID: 18551487]
  113. J Nat Prod. 2006 Jan;69(1):128-30 [PMID: 16441083]
  114. Chem Pharm Bull (Tokyo). 1966 May;14(5):474-8 [PMID: 5939659]
  115. Mol Biol Evol. 2010 Feb;27(2):221-4 [PMID: 19854763]
  116. Mycopathol Mycol Appl. 1963 Nov 15;21:1-18 [PMID: 14090933]
  117. Tetrahedron Lett. 1966 Jun;25:2867-73 [PMID: 4164202]

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